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PDBsum entry 7pec

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7pec calculated with MOLE 2.0 PDB id
7pec
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.47 28.9 -1.70 -0.49 16.4 81 3 3 3 1 2 1 0  
2 1.28 1.78 49.8 1.40 0.52 2.0 70 0 1 6 18 5 1 0  
3 1.37 2.01 54.8 -1.51 -0.28 20.2 82 9 3 8 4 4 2 0  
4 1.15 1.41 56.0 -1.28 0.00 17.4 80 11 4 4 8 5 1 0  
5 1.70 1.87 76.0 -1.43 -0.28 17.7 77 7 4 2 8 3 5 1  
6 1.45 2.72 100.7 -1.88 -0.31 25.3 74 9 4 4 6 1 2 0  
7 1.90 1.90 143.0 -2.02 -0.45 22.7 86 19 11 13 5 6 5 0  
8 2.47 4.70 150.4 -1.75 -0.21 22.3 80 24 10 10 8 4 6 0  
9 1.18 2.27 183.6 0.26 0.12 8.9 80 7 3 5 22 5 3 1  UNK 363 A UNK 366 A
10 1.22 1.45 201.3 -1.73 -0.38 23.7 82 24 12 14 12 4 8 2  
11 1.23 1.44 256.5 -1.87 -0.31 23.9 81 30 14 17 13 5 6 2  
12 1.64 1.80 306.7 -1.23 -0.29 19.7 83 32 14 15 27 4 11 0  
13 1.65 1.77 350.8 -1.48 -0.33 20.9 84 33 15 20 26 7 8 0  
14 1.78 1.80 362.0 -1.41 -0.26 20.3 82 38 15 17 28 5 9 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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