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PDBsum entry 7pcw

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 7pcw calculated with MOLE 2.0 PDB id
7pcw
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.16 2.97 29.0 -2.04 -0.35 23.8 76 5 4 3 2 2 1 0  
2 2.57 3.29 44.1 -1.62 -0.35 26.3 80 5 6 3 6 2 1 0  
3 2.18 2.81 44.2 -1.81 -0.60 24.0 90 3 5 3 3 0 0 0  
4 2.17 2.86 45.3 -1.20 -0.45 20.2 84 2 6 3 5 1 0 0  
5 1.82 2.02 32.1 -1.47 -0.56 15.1 71 0 4 1 3 3 5 0  OEH 301 A
6 1.82 2.12 40.9 -1.07 -0.45 22.8 83 2 5 2 4 0 0 0  OEH 301 B
7 1.12 1.11 50.5 0.09 0.00 4.7 75 0 3 2 5 2 4 0  OEH 301 B
8 1.22 1.49 72.1 -0.61 -0.27 10.1 76 1 6 2 6 4 5 0  OEH 301 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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