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PDBsum entry 7pc2
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Pore analysis for: 7pc2 calculated with  MOLE 2.0
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PDB id
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7pc2
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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30 pores,
coloured by radius |
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18 pores,
coloured by radius
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18 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.39 |
1.39 |
27.6 |
-0.96 |
0.06 |
11.4 |
77 |
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3 |
2 |
2 |
2 |
4 |
0 |
0 |
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NAG 1 x
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2 |
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1.35 |
1.35 |
28.5 |
-1.65 |
-0.45 |
15.3 |
95 |
2 |
2 |
5 |
1 |
2 |
0 |
0 |
NAG 604 B NAG 1 r NAG 2 r MAN 9 r
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3 |
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1.27 |
1.62 |
41.6 |
-1.82 |
-0.27 |
13.9 |
84 |
2 |
2 |
7 |
3 |
3 |
0 |
1 |
NAG 1 a NAG 2 a BMA 3 a MAN 4 a MAN 5 a MAN 6 a M
AN 7 a MAN 8 a MAN 10 a NAG 1 b NAG 2 b
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4 |
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1.52 |
1.93 |
53.0 |
-1.77 |
-0.22 |
27.7 |
89 |
8 |
2 |
3 |
6 |
0 |
0 |
0 |
NAG 1 d NAG 2 d NAG 1 e NAG 2 e MAN 4 e NAG 1 f
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5 |
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1.91 |
2.15 |
55.6 |
-2.08 |
-0.31 |
24.9 |
74 |
12 |
2 |
3 |
3 |
2 |
1 |
3 |
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6 |
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3.61 |
3.76 |
57.0 |
-3.11 |
-0.40 |
33.8 |
75 |
16 |
2 |
3 |
0 |
0 |
2 |
2 |
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7 |
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1.47 |
2.58 |
62.4 |
-1.92 |
-0.32 |
21.2 |
89 |
6 |
2 |
7 |
2 |
2 |
0 |
1 |
NAG 1 p NAG 2 q NAG 1 r NAG 2 r BMA 3 r MAN 9 r N
AG 1 s NAG 2 s BMA 3 s MAN 4 s MAN 7 s
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8 |
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1.91 |
2.15 |
65.5 |
-2.51 |
-0.36 |
28.4 |
77 |
14 |
4 |
4 |
3 |
2 |
2 |
1 |
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9 |
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1.46 |
2.44 |
72.3 |
-1.64 |
-0.35 |
19.1 |
88 |
5 |
3 |
9 |
4 |
1 |
0 |
2 |
NAG 1 p NAG 2 q NAG 1 r NAG 2 r BMA 3 r MAN 4 r M
AN 5 r MAN 6 r MAN 7 r MAN 8 r MAN 10 r MAN 11 r
NAG 1 s NAG 2 s BMA 3 s MAN 4 s MAN 7 s
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10 |
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1.57 |
1.98 |
87.3 |
-2.59 |
-0.33 |
30.3 |
78 |
18 |
3 |
5 |
2 |
2 |
2 |
2 |
NAG 1 x
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11 |
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1.56 |
1.99 |
96.7 |
-2.94 |
-0.40 |
33.1 |
81 |
20 |
5 |
6 |
2 |
2 |
2 |
0 |
NAG 1 x
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12 |
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1.14 |
2.48 |
107.9 |
-1.44 |
-0.34 |
14.8 |
82 |
10 |
5 |
12 |
6 |
2 |
3 |
3 |
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13 |
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1.20 |
2.49 |
146.5 |
-2.26 |
-0.45 |
22.9 |
83 |
20 |
5 |
15 |
5 |
0 |
3 |
3 |
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14 |
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1.58 |
2.01 |
182.8 |
-1.96 |
-0.46 |
20.3 |
86 |
11 |
7 |
14 |
3 |
7 |
0 |
0 |
NAG 602 C NAG 1 x NAG 1 z NAG 2 z
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15 |
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1.22 |
1.28 |
200.6 |
-1.35 |
-0.35 |
13.5 |
82 |
13 |
7 |
20 |
11 |
2 |
5 |
4 |
BMA 3 W MAN 8 W MAN 9 W NAG 1 f
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16 |
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1.30 |
2.29 |
204.6 |
-2.60 |
-0.51 |
26.4 |
84 |
20 |
8 |
16 |
1 |
5 |
2 |
0 |
NAG 602 C NAG 1 z NAG 2 z
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17 |
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1.28 |
2.61 |
269.9 |
-1.77 |
-0.54 |
15.8 |
89 |
7 |
5 |
17 |
1 |
6 |
1 |
0 |
NAG 2 5 BMA 3 5 MAN 7 5 MAN 8 5 NAG 1 6 NAG 2 6 N
AG 602 C NAG 604 C NAG 1 z NAG 2 z BMA 3 z MAN 4
z MAN 5 z MAN 6 z MAN 8 z
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18 |
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1.28 |
2.76 |
325.0 |
-2.67 |
-0.44 |
28.2 |
84 |
27 |
12 |
19 |
4 |
7 |
3 |
0 |
NAG 2 5 BMA 3 5 MAN 7 5 MAN 8 5 NAG 1 6 NAG 2 6 N
AG 602 C NAG 603 C NAG 604 C NAG 1 d NAG 2 d NAG
1 z NAG 2 z BMA 3 z MAN 4 z MAN 5 z MAN 8 z
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program