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PDBsum entry 7p7c

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Pore analysis for: 7p7c calculated with MOLE 2.0 PDB id
7p7c
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.13 3.19 32.8 -2.31 -0.33 28.0 73 4 5 2 1 2 2 0  
2 1.75 1.75 34.9 -1.68 -0.40 16.3 80 7 1 3 3 1 3 0  
3 1.35 1.45 39.6 -2.10 -0.29 16.0 78 4 4 5 0 4 0 0  
4 2.45 3.50 39.6 3.11 1.34 0.5 70 0 0 0 12 7 0 0  3PE 401 H
5 1.76 1.76 52.4 -1.87 -0.44 20.8 79 8 4 5 4 1 4 0  
6 1.62 1.88 77.1 -1.73 -0.42 27.3 82 10 8 1 5 1 1 0  
7 2.19 2.65 85.6 -1.09 -0.33 17.2 78 6 5 2 4 5 0 0  
8 1.67 1.70 106.6 -1.52 -0.51 14.8 83 7 5 5 2 5 0 0  
9 1.52 1.59 144.4 -0.55 -0.10 12.4 82 5 9 8 13 7 1 0  3PE 401 H
10 2.20 2.23 156.4 -1.43 -0.49 19.2 81 7 10 3 6 4 1 0  3PE 401 H
11 1.21 2.60 176.8 -1.05 -0.16 20.3 83 14 7 9 13 6 3 0  
12 2.17 2.37 39.3 -1.20 -0.17 18.3 88 5 2 3 7 1 1 0  3PE 804 L 3PE 1202 M 3PE 1203 M
13 2.58 3.44 42.5 1.27 0.68 9.9 75 5 0 0 7 6 0 0  3PE 802 L
14 2.76 3.59 42.8 -0.68 0.00 15.1 83 4 2 3 5 3 0 0  3PE 803 L
15 2.23 3.12 68.2 -0.30 -0.23 6.4 84 1 1 4 4 2 1 0  3PE 1202 M 3PE 1203 M
16 1.61 1.61 114.1 0.37 0.26 10.1 81 2 1 4 15 2 0 0  3PE 1202 M 3PE 1203 M LFA 502 N
17 1.21 1.21 118.8 -1.76 -0.41 18.9 84 11 4 11 3 4 4 0  3PE 804 L

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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