spacer
spacer

PDBsum entry 7os2

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 7os2 calculated with MOLE 2.0 PDB id
7os2
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
24 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.47 25.1 0.82 0.17 13.3 73 3 3 2 8 0 0 0  
2 1.93 2.74 34.1 -1.94 -0.27 29.7 80 4 1 2 2 1 2 0  
3 1.55 1.67 46.5 -1.06 -0.26 8.1 74 1 3 6 6 3 8 0  
4 1.59 1.76 53.3 -1.69 -0.39 23.3 79 7 9 7 2 7 2 0  
5 1.22 1.45 54.8 -0.35 -0.37 10.9 81 4 5 11 10 0 2 0  
6 1.21 1.51 57.5 -0.58 -0.19 19.1 80 5 6 3 13 0 0 0  
7 1.15 2.41 65.6 -1.53 -0.47 19.5 80 6 9 7 5 2 2 1  
8 2.29 3.35 76.5 -1.58 -0.62 18.4 88 6 7 12 10 0 2 0  
9 2.90 3.91 81.2 -2.05 -0.47 25.0 84 7 10 12 6 1 1 0  
10 1.59 1.78 82.0 -1.12 -0.24 20.9 79 9 8 8 5 6 2 0  
11 1.21 2.01 88.8 -1.14 -0.21 20.1 83 16 10 13 9 7 3 0  
12 1.17 1.96 102.7 -1.78 -0.36 23.2 85 15 13 18 10 2 5 0  
13 1.39 1.46 102.3 -1.05 -0.37 17.9 81 9 9 10 12 4 4 0  
14 2.29 2.86 133.6 -2.28 -0.55 27.5 84 15 11 12 8 1 1 0  
15 1.17 1.93 132.9 -1.78 -0.36 27.2 82 17 12 8 17 3 1 0  
16 1.17 2.24 137.2 -0.49 -0.06 14.4 84 6 6 7 16 0 7 0  
17 1.22 2.46 155.1 -1.75 -0.55 19.3 83 12 11 19 13 4 8 1  
18 1.47 2.15 159.8 -1.34 -0.39 18.8 87 8 7 9 16 0 5 0  
19 1.84 1.80 167.3 -2.15 -0.53 25.8 83 20 22 16 8 6 3 0  
20 1.24 1.24 170.3 -1.62 -0.34 23.8 81 21 14 14 20 5 3 0  
21 1.25 1.36 213.9 -1.81 -0.48 23.8 80 22 19 11 17 9 2 0  
22 1.74 2.13 212.8 -2.03 -0.51 28.5 84 26 26 11 14 3 2 0  
23 1.92 1.92 266.2 -2.15 -0.57 27.9 82 26 32 16 13 4 3 0  
24 1.42 1.93 43.4 -0.85 -0.33 4.9 72 1 0 7 2 3 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer