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PDBsum entry 7orb
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Pore analysis for: 7orb calculated with MOLE 2.0
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PDB id
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7orb
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.22 |
3.45 |
25.6 |
-2.51 |
-0.16 |
20.8 |
82 |
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4 |
1 |
5 |
1 |
3 |
0 |
0 |
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GOL 302 A GOL 501 H
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2 |
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2.90 |
3.49 |
37.2 |
-2.42 |
-0.60 |
22.4 |
85 |
3 |
2 |
5 |
1 |
0 |
2 |
0 |
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3 |
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2.87 |
3.54 |
51.0 |
-2.64 |
-0.73 |
17.1 |
83 |
3 |
2 |
5 |
0 |
0 |
2 |
0 |
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4 |
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2.33 |
3.05 |
56.9 |
-1.28 |
-0.40 |
6.0 |
94 |
1 |
2 |
13 |
3 |
2 |
0 |
0 |
GOL 302 A PO4 304 A
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5 |
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1.99 |
1.99 |
36.0 |
-1.92 |
-0.75 |
20.1 |
82 |
4 |
3 |
3 |
0 |
1 |
2 |
0 |
GOL 902 B
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6 |
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3.30 |
3.47 |
44.2 |
-1.43 |
-0.58 |
12.5 |
76 |
4 |
2 |
4 |
1 |
1 |
5 |
0 |
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7 |
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1.91 |
1.91 |
51.4 |
-1.41 |
-0.64 |
12.5 |
83 |
4 |
2 |
2 |
0 |
0 |
4 |
0 |
BTB 404 E CL 407 E CL 408 E
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8 |
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1.92 |
1.91 |
74.0 |
-1.32 |
-0.61 |
17.0 |
85 |
3 |
5 |
5 |
4 |
0 |
3 |
0 |
BTB 404 E CL 407 E CL 408 E
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9 |
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2.48 |
2.49 |
75.2 |
-1.22 |
-0.52 |
13.8 |
81 |
2 |
5 |
5 |
5 |
0 |
4 |
0 |
BTB 404 E
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10 |
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1.59 |
2.25 |
41.1 |
0.68 |
0.04 |
5.0 |
74 |
0 |
1 |
1 |
6 |
4 |
0 |
0 |
NAG 1 G
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11 |
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1.55 |
1.60 |
63.1 |
1.04 |
0.23 |
6.3 |
75 |
0 |
1 |
1 |
5 |
4 |
0 |
0 |
NAG 1 J NAG 2 J
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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