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PDBsum entry 7o4t

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Pore analysis for: 7o4t calculated with MOLE 2.0 PDB id
7o4t
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.79 2.79 32.1 -3.00 -0.66 32.5 79 5 2 3 0 0 1 0  
2 3.92 5.46 38.4 -2.66 -0.62 26.4 83 6 1 3 1 0 1 0  COA 802 A
3 2.15 2.15 40.7 0.64 0.22 7.7 86 4 1 5 9 3 0 0  
4 2.10 2.10 42.8 0.59 0.21 7.1 88 4 2 6 8 1 0 0  
5 2.08 2.08 43.5 0.51 0.18 7.0 82 4 1 5 8 2 2 0  
6 2.13 2.13 43.8 0.60 0.21 6.0 82 4 1 4 10 2 2 0  
7 2.55 4.87 52.4 -1.68 -0.42 12.8 82 4 0 8 5 2 3 0  COA 801 B COA 803 B
8 2.73 5.80 57.6 -1.64 -0.59 16.9 91 5 2 8 1 0 3 0  SO4 807 B
9 1.21 1.45 99.1 0.17 0.08 6.0 76 6 1 6 15 3 8 0  COA 803 B SO4 805 B
10 1.30 1.50 106.5 -0.56 -0.34 9.6 83 5 3 9 16 1 7 0  COA 802 A SO4 806 A
11 1.50 2.39 113.5 -1.42 -0.50 23.0 85 9 7 4 8 0 2 0  SO4 505 D SO4 506 D
12 1.29 2.24 132.5 -1.34 -0.35 19.4 81 10 5 4 10 0 5 0  COA 803 B SO4 805 B SO4 505 D SO4 506 D
13 1.32 1.69 134.9 -1.00 -0.41 13.8 85 9 6 12 15 0 6 0  COA 803 B SO4 805 B SO4 807 B
14 1.29 1.48 140.3 -1.04 -0.40 14.2 86 10 5 9 13 1 5 0  COA 802 A SO4 806 A SO4 807 A
15 1.24 1.63 198.6 -0.41 -0.28 10.9 85 11 8 13 28 1 8 0  COA 802 A SO4 806 A COA 803 B SO4 805 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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