PDBsum entry 7n4s

Tunnel analysis for: 7n4s calculated with

MOLE 2.0

PDB id

7n4s

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

1 tunnel, coloured by tunnel radius

7 tunnels, coloured by tunnel radius

7 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.46

2.49

24.7

0.80

0.04

6.7

82

1

1

2

6

1

0

1

0B0 701 A

2

1.45

2.45

26.0

1.03

0.11

6.4

79

1

1

1

7

1

0

1

0B0 701 A

3

1.52

3.41

26.4

0.87

0.49

14.3

74

2

1

1

6

3

0

1

0B0 701 A

4

1.36

1.91

27.8

1.15

0.57

12.6

79

2

1

1

8

2

0

1

0B0 701 A

5

1.52

3.19

29.0

0.86

0.47

14.1

77

2

2

2

6

3

0

0

0B0 701 A

6

1.36

1.87

30.0

1.51

0.58

10.9

76

1

1

1

10

2

0

1

0B0 701 A

7

1.36

2.10

30.4

1.01

0.51

13.3

81

2

2

2

8

2

0

0

0B0 701 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.