PDBsum entry 7n1v Go to PDB code:  Pore analysis for: 7n1v calculated with MOLE 2.0 PDB id 7n1v Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   25 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.52 31.4 -0.24 -0.16 10.1 82 2 2 2 4 0 2 0   2 1.31 1.43 36.3 -0.38 -0.27 8.1 86 2 1 4 8 0 0 0   3 2.66 3.45 46.9 -2.09 -0.53 17.8 89 4 3 9 4 0 1 0   4 2.49 3.09 48.6 -2.45 -0.56 23.4 84 5 7 5 1 3 0 0   5 1.46 1.70 51.4 -1.29 -0.45 9.6 87 0 6 6 2 2 2 0   6 1.40 1.58 57.3 -0.40 -0.38 5.8 87 3 2 9 6 1 1 2   7 1.17 1.63 68.6 -1.95 -0.66 19.0 87 6 6 4 4 0 1 0  NAG 1405 A NAG 2 D 8 1.25 1.31 69.9 -1.18 -0.47 11.1 84 2 3 10 8 1 0 0   9 1.39 1.53 79.3 -1.04 -0.51 5.5 87 3 0 12 6 2 3 1  NAG 1401 B 10 1.20 1.30 83.0 -1.35 -0.45 14.2 89 5 4 14 9 0 1 0   11 3.05 3.19 87.1 -1.68 -0.51 18.7 82 7 6 6 1 3 2 0  NAG 1405 A 12 2.27 3.60 88.2 -1.54 -0.51 17.9 90 7 7 10 4 0 2 0  NAG 1405 A 13 2.26 3.58 88.1 -2.10 -0.56 22.8 88 8 8 10 3 0 2 0   14 2.49 2.51 91.8 -2.38 -0.61 24.0 78 8 7 6 4 4 2 0   15 2.23 2.24 94.6 -1.22 -0.40 14.6 87 7 5 12 5 2 1 3   16 1.32 1.43 95.2 -1.22 -0.54 17.6 83 9 9 8 15 0 1 0   17 3.00 3.14 96.9 -1.69 -0.48 25.0 85 7 12 7 8 0 1 0   18 2.26 2.39 100.5 -1.51 -0.43 15.4 82 7 4 12 6 4 1 0   19 2.25 2.46 103.1 -1.29 -0.42 15.3 86 8 6 12 3 3 2 0  NAG 1405 A 20 2.46 2.77 101.9 -1.83 -0.54 19.3 80 8 8 7 6 4 3 0  NAG 1405 A 21 2.15 2.71 104.3 -1.33 -0.46 18.7 83 11 10 12 13 1 2 0   22 2.50 2.72 104.7 -2.46 -0.65 26.6 82 9 8 6 4 3 1 0   23 2.46 2.79 107.0 -1.22 -0.42 19.7 86 7 13 8 10 1 2 0  NAG 1405 A 24 2.33 2.45 110.6 -1.62 -0.49 17.5 87 8 5 12 5 3 0 0   25 2.46 2.79 114.9 -1.88 -0.57 21.2 84 9 9 7 6 3 2 0  NAG 1405 A 26 2.19 2.80 119.2 -1.28 -0.48 15.9 87 10 11 13 14 1 2 0   27 1.32 1.43 139.1 -1.36 -0.42 15.7 81 11 5 10 12 5 3 0   28 1.35 1.52 142.8 -1.46 -0.38 15.5 83 11 6 12 12 6 3 0   29 2.69 3.42 150.4 -1.19 -0.38 16.8 85 10 9 17 12 3 2 0  NAG 1405 A 30 1.36 1.73 163.1 -1.45 -0.41 15.1 85 12 7 14 11 6 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.