 |
PDBsum entry 7n1f
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 7n1f calculated with  MOLE 2.0
|
PDB id
|
|
|
|
7n1f
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
11 tunnels,
coloured by tunnel radius |
|
11 tunnels,
coloured by
tunnel radius
|
11 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.36 |
1.36 |
19.6 |
-1.51 |
-0.64 |
17.7 |
83 |
|
3 |
1 |
2 |
1 |
1 |
0 |
1 |
|
|
 |
|
2 |
 |
1.57 |
3.26 |
22.5 |
-1.54 |
-0.71 |
17.3 |
92 |
3 |
1 |
4 |
1 |
1 |
0 |
0 |
|
|
3 |
 |
1.60 |
1.60 |
24.8 |
-0.93 |
-0.55 |
12.8 |
88 |
3 |
0 |
3 |
3 |
1 |
0 |
1 |
|
|
4 |
 |
1.57 |
1.69 |
22.4 |
-1.33 |
-0.13 |
25.0 |
80 |
3 |
4 |
1 |
3 |
2 |
1 |
0 |
|
|
5 |
 |
1.57 |
1.67 |
23.2 |
-0.98 |
-0.16 |
26.6 |
90 |
3 |
3 |
1 |
3 |
0 |
0 |
0 |
|
|
6 |
 |
1.57 |
1.66 |
24.0 |
-1.69 |
-0.27 |
23.8 |
76 |
3 |
4 |
1 |
2 |
3 |
1 |
0 |
|
|
7 |
 |
1.51 |
2.60 |
24.5 |
-1.40 |
-0.16 |
25.4 |
80 |
3 |
4 |
1 |
3 |
2 |
1 |
0 |
|
|
8 |
 |
1.57 |
1.65 |
24.8 |
-1.77 |
-0.40 |
27.6 |
85 |
3 |
3 |
1 |
2 |
1 |
0 |
0 |
|
|
9 |
 |
1.50 |
2.60 |
25.3 |
-1.27 |
-0.19 |
28.7 |
90 |
3 |
3 |
1 |
3 |
0 |
0 |
0 |
|
|
10 |
 |
1.38 |
1.71 |
18.2 |
-0.62 |
-0.25 |
7.0 |
70 |
2 |
1 |
3 |
1 |
3 |
1 |
0 |
|
 |
11 |
 |
1.16 |
1.94 |
16.4 |
-1.79 |
-0.28 |
30.5 |
76 |
3 |
2 |
0 |
3 |
1 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program