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PDBsum entry 7mjh

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Pore analysis for: 7mjh calculated with MOLE 2.0 PDB id
7mjh
Pores calculated on whole structure Pores calculated excluding ligands

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33 pores, coloured by radius 35 pores, coloured by radius 35 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.53 1.60 25.3 -1.51 -0.59 12.7 91 0 3 4 2 0 1 0  
2 1.46 1.90 28.4 -0.30 -0.18 9.2 80 2 2 2 3 0 2 0  
3 3.49 4.68 30.8 -1.47 -0.74 14.1 90 1 2 5 2 0 1 0  
4 2.21 2.80 33.2 -0.33 -0.27 13.1 81 3 6 4 10 0 0 0  
5 2.21 2.80 35.2 -0.21 -0.24 12.0 81 3 6 4 10 0 1 0  
6 3.63 4.69 36.9 -2.11 -0.66 22.0 82 2 4 5 1 1 1 0  
7 2.17 2.80 57.3 -1.35 -0.47 19.5 83 3 5 6 9 1 1 0  
8 1.34 1.36 71.8 -1.07 -0.54 9.1 87 1 5 8 4 1 1 2  
9 1.34 1.35 84.6 -1.35 -0.52 8.2 90 1 5 11 5 2 1 0  
10 1.68 2.86 87.3 -2.04 -0.57 19.7 85 9 7 13 4 3 3 0  
11 1.79 3.70 89.0 -2.09 -0.60 23.3 87 10 10 12 4 2 1 0  
12 2.07 2.31 99.3 -1.04 -0.50 12.6 90 5 5 11 6 1 1 4  
13 1.70 2.87 108.7 -2.09 -0.44 22.6 79 7 9 10 4 6 3 0  
14 2.34 3.64 112.7 -1.57 -0.41 19.9 86 8 7 13 5 4 1 0  
15 1.77 2.82 121.6 -1.77 -0.51 20.8 85 9 12 16 7 4 4 0  
16 1.84 2.36 122.2 -1.94 -0.45 18.0 85 8 8 14 4 5 1 0  
17 1.23 2.72 125.5 -1.38 -0.31 20.4 86 7 12 11 8 4 1 0  
18 2.10 2.23 121.7 -1.18 -0.47 10.7 82 4 6 10 6 3 3 4  NAG 1306 A
19 2.43 2.59 121.6 -1.05 -0.30 18.4 84 5 7 10 7 3 1 2  
20 1.78 3.56 122.0 -1.80 -0.52 22.1 86 6 11 13 9 2 2 0  
21 2.35 3.64 128.5 -1.35 -0.53 15.7 89 7 8 18 7 1 2 2  
22 1.67 2.84 130.5 -1.48 -0.47 20.1 84 5 12 14 9 3 4 2  
23 1.45 2.71 134.4 -1.63 -0.44 21.4 84 8 17 14 10 4 4 0  
24 1.19 2.52 144.9 -1.36 -0.41 16.9 86 7 10 11 10 3 3 1  
25 1.81 3.72 141.6 -1.77 -0.50 21.9 81 7 14 11 9 5 4 1  NAG 1306 A
26 2.68 2.95 148.6 -1.53 -0.38 19.4 79 7 9 10 7 6 3 1  NAG 1306 A
27 2.34 3.62 155.5 -1.66 -0.54 17.1 84 9 10 17 7 4 4 1  NAG 1306 A
28 1.38 2.68 158.0 -1.48 -0.44 17.6 84 7 14 14 10 4 4 1  NAG 1306 A
29 1.21 2.48 160.0 -1.73 -0.50 20.1 84 7 10 15 9 3 4 0  
30 1.23 2.53 201.8 -1.60 -0.47 18.6 80 9 14 13 8 5 5 3  NAG 1306 A
31 2.13 3.24 30.8 -0.80 -0.20 24.5 78 1 6 1 5 1 3 0  
32 2.80 4.55 33.8 -0.78 -0.12 22.7 79 2 5 0 6 2 2 0  
33 1.46 2.81 33.8 -0.74 -0.19 23.7 76 1 6 1 6 1 3 0  
34 3.03 5.30 35.8 -0.67 -0.28 8.4 78 1 1 2 2 3 0 0  
35 2.15 2.78 58.1 -2.00 -0.21 19.4 78 5 4 3 2 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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