PDBsum entry 7ljs Go to PDB code:  Pore analysis for: 7ljs calculated with MOLE 2.0 PDB id 7ljs Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 1.12 30.1 -2.30 -0.55 28.7 74 6 3 1 1 1 1 0   2 2.30 2.56 31.4 -1.93 -0.46 24.8 70 4 6 1 1 1 4 2   3 1.69 1.71 36.5 -1.03 -0.33 13.4 81 4 2 5 4 2 1 0  FAD 1106 A 4 1.98 3.08 39.3 0.52 0.35 15.7 68 5 3 0 8 4 0 0   5 1.79 1.78 55.7 -2.74 -0.55 33.5 75 9 8 2 2 1 3 1   6 1.11 1.11 63.3 -1.54 -0.47 21.6 84 6 7 6 4 1 3 0  FAD 1106 A 7 1.48 1.74 77.3 -1.24 -0.33 21.1 82 7 9 3 8 2 2 0  FAD 1106 C 8 1.52 2.48 89.1 -1.75 -0.53 22.1 87 12 8 9 7 0 2 0   9 1.71 2.82 97.7 -1.56 -0.43 23.8 78 11 6 2 6 2 3 0   10 1.93 2.33 105.7 -2.09 -0.41 27.6 76 13 11 2 5 3 4 0   11 1.17 2.61 116.7 -1.60 -0.52 17.4 83 12 10 12 7 5 4 1   12 1.20 1.36 135.2 -0.41 -0.32 7.1 92 8 4 18 15 2 0 2  FMN 1105 A Y3G 1107 A 13 1.97 2.36 138.6 -1.32 -0.33 21.5 79 11 11 7 11 3 4 1  FAD 1106 C 14 1.36 1.54 153.9 -0.73 -0.35 13.8 90 10 11 18 18 1 4 2  FAD 1106 A FMN 1105 B Y3G 1107 B 15 1.49 2.82 187.8 -1.68 -0.42 18.3 82 18 12 17 12 7 4 1  FMN 1105 C Y3G 1107 C 16 1.36 1.36 187.7 -1.00 -0.35 15.9 87 16 12 16 20 2 6 2  FMN 1105 C Y3G 1107 C 17 1.41 1.35 208.0 -1.23 -0.50 12.9 88 20 10 22 17 6 4 2  FMN 1105 B Y3G 1107 B 18 1.55 2.93 225.0 -1.78 -0.46 20.8 86 26 17 22 16 3 4 1  FMN 1105 C Y3G 1107 C 19 1.63 2.27 226.7 -1.46 -0.40 18.5 85 21 18 23 20 5 5 1  FMN 1105 C FAD 1106 C Y3G 1107 C 20 1.73 1.73 229.3 -1.79 -0.43 21.4 79 21 20 12 11 7 7 1  FMN 1105 C Y3G 1107 C 21 1.19 1.88 244.2 -1.99 -0.53 21.7 81 23 22 16 14 5 10 0   22 1.36 2.92 249.8 -1.97 -0.51 21.1 83 29 19 20 17 5 7 0   23 1.44 2.05 272.3 -1.69 -0.47 21.7 83 26 22 17 15 6 5 1  FMN 1105 C Y3G 1107 C FAD 1106 D 24 1.60 2.15 271.7 -1.45 -0.42 18.7 82 19 18 17 17 8 7 1  FAD 1106 A FMN 1105 C Y3G 1107 C 25 1.61 1.77 284.2 -1.49 -0.45 20.1 84 23 25 17 20 5 6 1  FMN 1105 C FAD 1106 C Y3G 1107 C 26 1.45 1.92 293.6 -1.99 -0.50 23.6 80 29 26 14 16 7 10 0   27 1.65 2.28 300.5 -1.92 -0.49 23.5 77 26 28 9 14 8 12 0   28 1.26 1.79 301.7 -1.91 -0.55 22.7 79 24 29 11 14 6 10 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.