PDBsum entry 7ld3 Go to PDB code:  Tunnel analysis for: 7ld3 calculated with MOLE 2.0 PDB id 7ld3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.79 1.81 18.6 -2.74 -0.35 30.8 82 5 1 2 0 1 0 0   2 1.37 1.37 21.8 -1.64 -0.13 21.7 83 5 1 2 2 2 0 0   3 1.47 1.47 33.0 -0.69 -0.55 10.1 87 2 1 5 3 1 1 2   4 1.78 1.80 35.7 -0.82 -0.48 10.4 85 4 1 5 2 2 1 2   5 1.47 1.47 36.4 -0.80 -0.55 10.5 84 3 1 5 2 1 2 2   6 1.78 1.80 39.1 -0.92 -0.49 10.9 82 5 1 5 1 2 2 2   7 1.12 1.25 35.4 1.74 0.38 2.5 72 1 1 1 12 3 0 1   8 1.33 1.82 30.7 0.53 0.41 7.5 82 1 2 4 7 4 0 0  ADN 401 R 9 1.34 1.53 15.1 1.19 0.24 1.4 85 0 0 2 5 2 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.