PDBsum entry 7kms Go to PDB code:  Pore analysis for: 7kms calculated with MOLE 2.0 PDB id 7kms Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   46 pores, coloured by radius 46 pores, coloured by radius 46 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.14 43.8 0.20 0.00 3.8 72 1 0 2 5 3 2 2   2 3.50 3.50 50.3 -1.55 -0.39 19.6 80 3 5 5 4 3 1 0   3 3.48 3.84 60.9 -1.46 -0.48 16.2 87 7 3 7 5 1 1 0   4 4.07 4.28 68.4 -1.13 -0.25 12.2 87 3 5 7 5 3 2 1   5 1.18 1.34 94.7 0.37 0.00 10.7 84 6 6 6 20 2 1 0   6 3.48 3.89 98.2 -1.67 -0.40 17.0 82 7 8 10 7 4 3 1   7 1.23 1.23 98.4 -1.18 -0.33 17.3 81 8 9 9 16 3 1 0   8 1.52 1.87 102.2 0.72 0.19 3.9 78 0 2 6 12 8 3 1  NAG 1313 C 9 1.33 1.57 107.2 0.09 -0.05 4.6 82 1 3 9 12 5 3 2  NAG 1313 C 10 1.33 2.71 113.8 0.18 0.00 8.7 85 6 4 9 15 2 1 2  NAG 1305 B 11 1.18 2.92 113.6 -0.65 -0.29 9.7 90 7 2 12 12 1 1 0  NAG 1305 C 12 1.16 2.51 120.7 -0.60 -0.10 12.7 83 9 5 11 13 5 4 1   13 1.23 1.22 129.0 -1.14 -0.42 14.5 82 11 6 11 11 5 5 0  NAG 1308 C 14 2.48 3.74 129.3 -1.53 -0.43 13.9 85 9 7 16 7 4 4 1   15 2.42 3.81 136.8 -1.33 -0.31 11.2 85 5 9 16 7 6 5 2   16 1.17 2.54 157.3 -0.83 -0.35 9.9 91 7 4 21 15 1 2 0  NAG 1305 C 17 1.32 1.61 168.0 -1.75 -0.44 19.1 86 12 10 21 10 4 3 0   18 1.96 3.30 175.1 -1.30 -0.34 16.0 86 8 13 17 9 6 5 1   19 1.20 1.23 180.8 -1.06 -0.39 15.2 87 11 8 17 18 2 4 0  NAG 1308 C 20 1.27 1.27 29.6 -1.01 -0.40 8.0 87 1 2 5 3 2 1 0   21 1.70 1.72 41.6 -0.65 -0.07 9.7 71 2 2 3 5 6 0 0   22 1.21 2.48 49.4 -0.49 0.59 10.5 62 3 2 0 8 8 3 1   23 1.76 2.00 50.3 -1.72 -0.23 25.0 71 4 6 4 1 7 0 0   24 1.72 1.71 62.0 -1.78 -0.22 23.1 81 6 7 3 2 7 1 0   25 2.77 2.87 63.6 -2.23 -0.35 22.1 83 7 8 6 2 5 1 0   26 1.13 3.19 83.0 -1.20 -0.25 17.8 70 6 8 5 4 10 0 0   27 1.20 1.55 95.2 -1.71 -0.48 17.0 84 2 6 9 5 1 3 2  NAG 705 F 28 1.76 2.00 105.5 -1.30 -0.27 14.8 76 2 5 10 4 6 1 0  NAG 705 F 29 1.28 1.72 150.3 -1.44 -0.30 16.9 76 4 9 10 7 7 3 2  NAG 705 F 30 1.21 2.21 32.1 0.94 0.44 4.3 72 0 2 3 7 4 0 0   31 1.72 1.72 56.1 -1.33 -0.17 15.1 73 6 4 5 4 7 0 0   32 2.41 2.91 60.0 -1.45 -0.03 14.1 78 4 6 7 3 7 0 0   33 1.72 1.72 64.8 -1.14 0.01 17.9 78 6 4 5 3 7 0 0   34 1.34 1.34 26.7 -0.50 -0.62 8.2 86 1 2 1 2 1 1 0   35 1.31 1.32 45.1 -1.01 -0.17 8.1 87 3 3 9 4 3 0 0   36 1.27 1.38 46.2 1.66 0.58 4.7 79 3 0 2 15 3 1 0   37 1.59 1.59 47.3 -0.73 -0.10 10.2 72 2 4 4 5 6 0 0   38 1.33 1.30 58.7 -0.33 0.01 7.6 81 2 2 6 5 6 0 0   39 1.33 1.33 63.7 -0.72 -0.36 9.3 77 2 5 5 6 6 0 0   40 1.27 1.36 90.8 -0.77 -0.06 9.8 84 5 3 15 7 8 1 1   41 1.33 1.35 93.2 0.12 0.20 9.6 81 5 3 10 10 8 1 2   42 1.36 1.37 92.3 -1.76 -0.23 16.2 83 8 7 11 4 8 1 0   43 1.43 1.42 97.6 -1.21 -0.14 15.1 82 7 6 9 5 10 1 0   44 1.42 1.59 104.4 -0.34 0.12 11.6 79 6 6 11 10 10 1 2   45 1.13 2.85 29.1 0.30 0.03 8.9 75 1 3 3 5 2 1 0   46 1.17 2.98 33.1 0.84 0.19 8.6 73 0 3 3 6 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.