PDBsum entry 7klh

Pore analysis for: 7klh calculated with

MOLE 2.0

PDB id

7klh

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.34

2.44

31.6

0.94

0.36

1.5

70

0

0

2

4

5

0

1

2

3.74

3.74

31.7

-1.58

-0.60

13.2

80

2

1

1

0

0

2

0

3

3.03

4.21

32.3

-1.00

-0.44

10.0

80

2

2

6

5

2

2

0

NAG 2001 B

4

2.19

2.26

32.8

-1.15

-0.65

11.2

87

1

2

2

1

0

2

0

5

3.07

3.13

43.9

-0.28

-0.32

6.4

88

1

2

7

2

3

0

0

6

1.26

1.26

48.4

-0.43

-0.17

8.9

78

2

1

4

2

5

1

2

7

1.96

2.10

59.3

-0.67

-0.24

11.7

80

2

3

4

4

1

2

0

NAG 2001 A

8

2.00

2.25

65.6

-0.35

-0.35

5.8

85

2

2

8

6

3

3

0

NAG 2001 A

9

1.66

2.63

39.7

-0.69

-0.33

12.0

83

3

2

3

2

2

2

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.