spacer
spacer

PDBsum entry 7ki0

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7ki0 calculated with MOLE 2.0 PDB id
7ki0
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
9 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.92 3.32 26.0 -2.07 -0.79 9.2 83 3 1 7 1 1 0 0  
2 1.90 2.89 27.2 -1.86 -0.46 20.3 83 5 1 2 4 0 0 0  
3 1.61 1.80 32.4 -1.79 -0.61 24.5 87 5 3 2 3 0 0 1  
4 1.66 1.99 32.9 -1.22 -0.21 22.6 84 5 2 2 3 1 0 1  
5 3.17 3.42 33.8 -2.14 -0.23 27.2 79 8 2 5 2 3 0 1  
6 1.68 2.01 40.1 -1.66 -0.31 24.8 84 6 3 3 4 1 0 0  
7 1.36 4.07 97.0 -1.39 -0.59 17.5 86 5 6 8 3 2 1 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer