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PDBsum entry 7khc
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Tunnel analysis for: 7khc calculated with MOLE 2.0
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PDB id
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7khc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.13 |
1.27 |
16.7 |
-1.47 |
-0.54 |
9.8 |
92 |
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1 |
0 |
2 |
1 |
0 |
1 |
0 |
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DT 11 X DT 12 X DA 73 Y
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2 |
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2.08 |
2.08 |
16.4 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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DC 60 X DA 61 X DC 62 X DT 63 X DG 21 Y DG 22 Y DT 23 Y
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3 |
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2.12 |
2.12 |
19.6 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
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DC 60 X DA 61 X DC 62 X DG 22 Y DT 23 Y DG 24 Y
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4 |
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1.34 |
2.36 |
15.5 |
1.24 |
0.59 |
17.9 |
73 |
1 |
2 |
0 |
6 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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