PDBsum entry 7k5c Go to PDB code:  Pore analysis for: 7k5c calculated with MOLE 2.0 PDB id 7k5c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   47 pores, coloured by radius 47 pores, coloured by radius 47 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.73 4.71 25.9 -1.38 -0.29 29.4 82 4 4 2 4 0 0 0   2 3.81 4.73 26.0 -1.35 -0.29 29.2 82 4 4 2 4 0 0 0   3 3.79 4.71 26.2 -1.30 -0.27 28.7 82 4 4 3 4 0 0 0   4 3.33 3.54 38.8 -2.26 -0.64 27.2 79 8 4 3 2 0 0 0   5 3.28 4.80 41.6 -2.02 -0.44 22.6 78 6 4 4 3 1 0 0   6 3.31 4.81 42.0 -2.06 -0.45 23.3 77 6 4 4 3 1 0 0   7 3.27 4.79 42.1 -2.00 -0.46 23.2 77 6 5 4 3 1 0 0   8 3.26 4.58 42.1 -1.98 -0.45 23.4 77 6 5 4 3 1 0 0   9 3.27 4.82 42.3 -1.95 -0.44 22.3 77 6 5 4 3 1 0 0   10 3.26 4.64 42.5 -1.94 -0.46 22.4 77 6 5 4 3 1 0 0   11 3.29 4.50 49.7 -2.22 -0.57 25.6 82 6 7 5 2 1 0 0   12 3.15 3.50 51.0 -1.46 -0.40 20.7 82 8 3 4 5 0 0 0   13 3.33 3.53 52.3 -2.30 -0.71 29.0 85 8 7 4 4 0 0 0   14 3.28 4.49 57.0 -2.14 -0.54 26.4 83 7 8 5 5 1 0 0   15 3.27 4.64 57.9 -2.09 -0.55 25.9 83 7 8 5 5 1 0 0   16 3.33 3.53 58.2 -2.51 -0.66 30.6 78 10 5 3 2 0 0 0   17 3.27 4.63 62.7 -1.98 -0.48 25.6 83 7 9 6 5 1 0 0   18 3.31 4.43 63.1 -1.97 -0.49 26.2 83 7 9 6 5 1 0 0   19 3.27 4.43 63.2 -1.93 -0.45 25.9 83 7 9 6 5 1 0 0   20 3.24 3.50 68.0 -1.70 -0.49 24.7 82 9 7 5 6 1 0 0   21 3.33 3.53 73.0 -2.55 -0.71 32.8 83 11 8 4 4 0 0 0   22 3.05 3.54 76.0 -1.95 -0.42 27.4 80 12 4 4 5 0 0 0   23 3.32 3.53 79.9 -2.80 -0.53 35.6 78 15 4 2 4 0 0 0   24 3.32 3.52 93.3 -2.02 -0.49 28.5 81 13 9 5 6 1 0 0   25 3.10 3.55 93.3 -2.18 -0.38 30.1 81 15 2 4 7 0 0 0   26 3.30 3.49 97.7 -2.35 -0.53 31.0 80 15 6 4 5 1 0 0   27 3.24 3.45 129.2 -2.21 -0.50 28.9 78 20 7 5 8 1 0 0   28 3.30 3.47 138.9 -2.35 -0.55 30.1 80 20 10 6 7 1 0 0   29 3.21 3.43 150.6 -2.21 -0.51 29.8 81 21 11 8 10 1 0 0   30 1.54 2.04 27.5 -1.55 -0.18 16.1 80 4 2 3 2 1 0 0   31 1.49 1.49 33.8 -1.19 -0.24 21.9 80 3 5 4 3 1 1 0   32 1.40 1.49 38.0 -1.89 -0.71 17.2 86 4 5 4 3 0 1 0   33 1.26 1.73 38.4 0.06 0.02 9.3 82 2 2 4 7 0 2 0   34 1.25 1.59 41.0 -0.32 -0.15 12.7 80 2 3 3 7 0 3 0   35 1.27 1.90 47.6 -0.94 -0.21 16.2 83 3 3 4 8 0 2 0   36 2.20 2.20 56.9 -1.92 -0.39 21.5 82 5 4 6 3 1 2 0   37 1.71 2.68 60.8 -2.42 -0.63 26.2 83 4 6 4 2 0 2 0   38 1.38 2.14 104.3 -1.73 -0.50 19.5 81 9 8 8 7 3 1 0   39 1.32 1.47 121.0 -1.40 -0.45 18.4 83 9 9 11 9 4 1 0   40 1.36 1.46 144.1 -2.24 -0.56 26.6 81 14 14 10 7 3 2 0   41 1.45 1.62 149.4 -1.71 -0.49 22.6 83 12 13 12 9 4 1 0   42 1.27 1.31 194.2 -1.59 -0.36 22.3 81 15 14 14 11 7 1 0   43 1.56 1.73 212.8 -1.63 -0.41 22.7 80 16 16 13 11 7 1 0   44 1.65 1.79 66.4 -1.38 -0.28 16.8 86 5 5 5 4 2 0 0   45 1.64 1.79 66.4 -1.38 -0.28 16.8 86 5 5 5 4 2 0 0   46 1.48 2.88 68.1 -1.71 -0.28 18.3 86 4 5 5 4 2 0 0   47 1.47 2.87 68.1 -1.71 -0.28 18.3 86 4 5 5 4 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.