 |
PDBsum entry 7k20
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 7k20 calculated with MOLE 2.0
|
PDB id
|
|
|
|
7k20
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
17 pores,
coloured by radius |
 |
25 pores,
coloured by radius
|
25 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.19 |
1.19 |
31.7 |
-1.31 |
-0.38 |
18.7 |
84 |
 |
5 |
3 |
2 |
3 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.64 |
1.71 |
32.2 |
-0.77 |
-0.02 |
19.7 |
76 |
4 |
4 |
0 |
2 |
3 |
1 |
0 |
HIC 73 D
|
 |
3 |
 |
1.64 |
1.70 |
32.8 |
-1.00 |
-0.04 |
22.6 |
77 |
5 |
4 |
0 |
3 |
3 |
1 |
0 |
HIC 73 D
|
 |
4 |
 |
2.06 |
3.37 |
35.5 |
-1.48 |
-0.38 |
22.3 |
87 |
5 |
5 |
2 |
5 |
0 |
0 |
0 |
HIC 73 A
|
 |
5 |
 |
1.70 |
1.95 |
36.2 |
-2.52 |
-0.41 |
31.9 |
80 |
5 |
4 |
1 |
2 |
1 |
0 |
0 |
ADP 802 B
|
 |
6 |
 |
1.43 |
1.85 |
39.4 |
-1.19 |
-0.19 |
17.3 |
78 |
5 |
2 |
2 |
4 |
4 |
1 |
0 |
|
 |
7 |
 |
1.19 |
1.19 |
41.2 |
-0.66 |
-0.40 |
11.0 |
82 |
2 |
3 |
3 |
5 |
2 |
1 |
0 |
|
 |
8 |
 |
1.71 |
1.96 |
43.4 |
0.70 |
0.23 |
4.3 |
78 |
1 |
1 |
3 |
9 |
4 |
0 |
0 |
1T4 803 A
|
 |
9 |
 |
1.60 |
1.61 |
44.8 |
-2.87 |
-0.45 |
36.6 |
84 |
5 |
5 |
1 |
4 |
1 |
0 |
0 |
HIC 73 D ADP 802 D
|
 |
10 |
 |
1.63 |
2.50 |
45.5 |
-2.66 |
-0.58 |
32.7 |
82 |
5 |
7 |
1 |
2 |
1 |
0 |
0 |
HIC 73 D ADP 802 D
|
 |
11 |
 |
1.56 |
2.42 |
50.6 |
-0.05 |
0.12 |
10.2 |
77 |
4 |
1 |
3 |
6 |
5 |
0 |
0 |
1T4 803 B
|
 |
12 |
 |
2.10 |
3.12 |
52.3 |
-1.15 |
-0.31 |
19.9 |
86 |
6 |
6 |
3 |
7 |
1 |
0 |
0 |
HIC 73 C HIC 73 D
|
 |
13 |
 |
2.10 |
3.40 |
52.4 |
-1.11 |
-0.37 |
20.8 |
88 |
5 |
7 |
2 |
7 |
0 |
0 |
0 |
HIC 73 C HIC 73 D
|
 |
14 |
 |
2.13 |
3.33 |
57.1 |
-1.31 |
-0.31 |
19.3 |
86 |
6 |
6 |
4 |
6 |
1 |
0 |
0 |
HIC 73 B
|
 |
15 |
 |
1.64 |
1.71 |
57.9 |
-2.12 |
-0.27 |
28.1 |
76 |
7 |
4 |
1 |
3 |
4 |
1 |
0 |
ADP 802 D
|
 |
16 |
 |
1.18 |
1.17 |
64.9 |
-2.27 |
-0.39 |
27.2 |
83 |
10 |
6 |
3 |
6 |
2 |
1 |
0 |
|
 |
17 |
 |
1.61 |
1.62 |
66.4 |
-1.69 |
-0.28 |
21.1 |
83 |
9 |
4 |
5 |
4 |
3 |
2 |
0 |
|
 |
18 |
 |
1.22 |
1.22 |
67.6 |
-1.65 |
-0.34 |
22.1 |
84 |
9 |
5 |
3 |
10 |
2 |
1 |
0 |
HIC 73 A
|
 |
19 |
 |
1.64 |
1.63 |
67.5 |
-1.01 |
-0.24 |
16.4 |
84 |
8 |
3 |
5 |
7 |
3 |
2 |
0 |
HIC 73 B
|
 |
20 |
 |
1.20 |
1.20 |
74.8 |
-1.62 |
-0.58 |
16.4 |
87 |
7 |
4 |
8 |
3 |
3 |
0 |
0 |
|
 |
21 |
 |
1.55 |
2.25 |
80.1 |
-0.94 |
-0.10 |
16.9 |
76 |
7 |
3 |
2 |
7 |
6 |
1 |
0 |
1T4 803 B
|
 |
22 |
 |
1.54 |
2.50 |
81.2 |
-0.22 |
-0.02 |
11.7 |
78 |
6 |
2 |
2 |
10 |
6 |
1 |
0 |
HIC 73 B 1T4 803 B
|
 |
23 |
 |
1.51 |
2.18 |
94.4 |
-1.55 |
-0.35 |
24.0 |
86 |
10 |
9 |
4 |
12 |
1 |
0 |
0 |
HIC 73 B HIC 73 C ADP 802 D
|
 |
24 |
 |
1.61 |
1.61 |
102.3 |
-1.23 |
-0.24 |
21.1 |
85 |
12 |
8 |
6 |
12 |
3 |
2 |
0 |
HIC 73 C HIC 73 D
|
 |
25 |
 |
1.64 |
1.61 |
117.9 |
-0.96 |
-0.14 |
19.4 |
80 |
11 |
7 |
3 |
12 |
7 |
1 |
0 |
1T4 803 B HIC 73 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |