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PDBsum entry 7k20

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Pore analysis for: 7k20 calculated with MOLE 2.0 PDB id
7k20
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 25 pores, coloured by radius 25 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 1.19 31.7 -1.31 -0.38 18.7 84 5 3 2 3 1 0 0  
2 1.64 1.71 32.2 -0.77 -0.02 19.7 76 4 4 0 2 3 1 0  HIC 73 D
3 1.64 1.70 32.8 -1.00 -0.04 22.6 77 5 4 0 3 3 1 0  HIC 73 D
4 2.06 3.37 35.5 -1.48 -0.38 22.3 87 5 5 2 5 0 0 0  HIC 73 A
5 1.70 1.95 36.2 -2.52 -0.41 31.9 80 5 4 1 2 1 0 0  ADP 802 B
6 1.43 1.85 39.4 -1.19 -0.19 17.3 78 5 2 2 4 4 1 0  
7 1.19 1.19 41.2 -0.66 -0.40 11.0 82 2 3 3 5 2 1 0  
8 1.71 1.96 43.4 0.70 0.23 4.3 78 1 1 3 9 4 0 0  1T4 803 A
9 1.60 1.61 44.8 -2.87 -0.45 36.6 84 5 5 1 4 1 0 0  HIC 73 D ADP 802 D
10 1.63 2.50 45.5 -2.66 -0.58 32.7 82 5 7 1 2 1 0 0  HIC 73 D ADP 802 D
11 1.56 2.42 50.6 -0.05 0.12 10.2 77 4 1 3 6 5 0 0  1T4 803 B
12 2.10 3.12 52.3 -1.15 -0.31 19.9 86 6 6 3 7 1 0 0  HIC 73 C HIC 73 D
13 2.10 3.40 52.4 -1.11 -0.37 20.8 88 5 7 2 7 0 0 0  HIC 73 C HIC 73 D
14 2.13 3.33 57.1 -1.31 -0.31 19.3 86 6 6 4 6 1 0 0  HIC 73 B
15 1.64 1.71 57.9 -2.12 -0.27 28.1 76 7 4 1 3 4 1 0  ADP 802 D
16 1.18 1.17 64.9 -2.27 -0.39 27.2 83 10 6 3 6 2 1 0  
17 1.61 1.62 66.4 -1.69 -0.28 21.1 83 9 4 5 4 3 2 0  
18 1.22 1.22 67.6 -1.65 -0.34 22.1 84 9 5 3 10 2 1 0  HIC 73 A
19 1.64 1.63 67.5 -1.01 -0.24 16.4 84 8 3 5 7 3 2 0  HIC 73 B
20 1.20 1.20 74.8 -1.62 -0.58 16.4 87 7 4 8 3 3 0 0  
21 1.55 2.25 80.1 -0.94 -0.10 16.9 76 7 3 2 7 6 1 0  1T4 803 B
22 1.54 2.50 81.2 -0.22 -0.02 11.7 78 6 2 2 10 6 1 0  HIC 73 B 1T4 803 B
23 1.51 2.18 94.4 -1.55 -0.35 24.0 86 10 9 4 12 1 0 0  HIC 73 B HIC 73 C ADP 802 D
24 1.61 1.61 102.3 -1.23 -0.24 21.1 85 12 8 6 12 3 2 0  HIC 73 C HIC 73 D
25 1.64 1.61 117.9 -0.96 -0.14 19.4 80 11 7 3 12 7 1 0  1T4 803 B HIC 73 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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