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PDBsum entry 7k0r

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Pore analysis for: 7k0r calculated with MOLE 2.0 PDB id
7k0r
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.73 1.84 25.8 -0.57 -0.22 13.6 81 1 2 0 4 1 2 0  
2 1.65 1.79 30.0 -0.38 -0.21 12.8 83 1 2 0 5 1 2 0  
3 2.29 5.90 31.1 -3.50 -0.85 13.8 94 1 4 10 0 0 0 0  
4 3.55 5.04 33.4 1.64 0.45 6.1 93 0 1 3 11 0 1 0  
5 3.46 4.94 33.4 1.69 0.46 5.8 93 0 1 3 11 0 1 0  
6 1.75 1.88 39.5 0.21 0.00 9.9 84 1 2 1 7 1 2 0  
7 1.87 1.86 45.0 -0.06 -0.16 10.8 87 1 3 1 9 1 2 0  
8 1.66 1.88 54.1 -1.41 -0.34 9.2 94 1 4 11 7 0 1 0  
9 1.53 1.92 63.1 -0.59 -0.17 5.4 93 0 4 12 12 0 3 0  
10 1.65 1.81 70.3 -1.50 -0.53 20.6 80 5 9 1 4 2 2 0  
11 1.64 1.81 76.7 -1.47 -0.48 18.9 79 5 7 2 4 2 2 0  
12 1.90 2.01 76.2 -1.16 -0.32 16.9 81 5 3 5 3 2 0 1  U5P 401 C
13 1.56 1.73 82.6 0.75 0.16 4.3 91 0 3 9 20 0 5 0  
14 1.61 1.82 95.1 -0.47 -0.22 14.5 85 3 7 3 10 2 3 0  
15 1.65 1.81 98.0 -1.12 -0.34 15.9 88 3 11 8 9 1 2 0  
16 1.58 1.78 99.3 -1.05 -0.44 17.8 83 5 10 3 10 2 3 0  
17 1.60 1.79 101.9 -1.50 -0.43 15.9 87 4 12 10 8 1 2 0  
18 1.62 2.06 111.4 -1.53 -0.43 15.0 86 4 12 11 9 1 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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