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PDBsum entry 7jn4

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 7jn4 calculated with MOLE 2.0 PDB id
7jn4
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.36 2.35 90.7 -0.84 -0.34 10.9 77 6 2 4 6 4 3 0  
2 1.33 2.29 97.5 -2.55 -0.46 23.5 80 12 5 9 1 5 1 0  
3 1.68 4.19 98.6 -2.54 -0.46 27.0 82 15 5 8 3 3 0 0  
4 1.47 2.40 120.6 -0.71 -0.40 15.6 86 5 9 6 14 3 2 0  
5 1.46 2.40 120.7 -0.70 -0.39 15.8 86 5 9 6 14 3 2 0  
6 1.45 2.32 120.7 -0.74 -0.39 16.7 86 5 9 6 14 3 2 0  
7 1.63 4.22 121.3 -2.28 -0.39 24.8 81 15 5 9 4 5 1 0  
8 1.56 2.23 126.3 -1.02 -0.43 19.6 88 8 11 7 14 2 1 0  
9 1.61 2.38 127.6 -0.72 -0.39 18.5 88 5 13 8 13 2 1 0  
10 1.57 2.37 127.6 -0.76 -0.39 19.1 88 5 13 8 13 2 1 0  
11 1.21 2.59 137.1 -0.65 -0.35 17.9 86 5 13 8 14 4 1 0  
12 1.54 2.38 133.8 -0.69 -0.16 22.9 86 11 12 5 19 1 2 0  
13 1.34 2.42 139.9 -0.89 -0.22 22.4 83 10 10 4 20 4 3 0  
14 1.35 2.41 140.6 -0.55 -0.14 20.9 84 10 10 4 19 2 3 0  
15 1.37 2.22 140.7 -0.62 -0.15 20.8 84 10 10 4 18 2 3 0  
16 1.35 2.38 140.3 -0.85 -0.22 21.8 82 10 10 4 18 4 3 0  
17 1.35 2.37 140.1 -0.92 -0.23 21.9 83 10 10 4 19 4 3 0  
18 1.35 2.37 140.2 -0.82 -0.21 22.2 85 10 10 4 20 2 3 0  
19 1.44 2.17 149.7 -0.75 -0.19 20.8 81 10 10 4 20 6 3 0  
20 1.43 2.17 149.7 -0.78 -0.19 21.0 81 10 10 4 19 6 3 0  
21 1.55 2.28 155.3 -0.80 -0.18 22.2 84 13 12 5 19 3 2 0  
22 1.59 2.31 155.0 -0.99 -0.23 22.9 84 13 12 5 20 4 2 0  
23 1.34 2.40 167.7 -0.78 -0.32 17.0 85 5 14 10 16 6 3 0  
24 1.25 1.21 176.7 -1.60 -0.26 21.4 79 14 10 11 11 9 1 0  
25 1.52 2.22 180.7 -0.64 -0.14 17.8 81 10 11 6 21 7 5 0  
26 1.49 2.17 180.6 -0.65 -0.15 18.3 81 10 11 6 22 6 5 0  
27 1.20 2.16 182.0 -0.56 -0.11 18.8 82 10 12 7 25 5 4 0  
28 1.19 1.54 218.1 -1.13 -0.24 22.0 83 19 13 7 21 7 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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