 |
PDBsum entry 7glg
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 7glg calculated with MOLE 2.0
|
PDB id
|
|
|
|
7glg
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
5 tunnels,
coloured by tunnel radius |
 |
10 tunnels,
coloured by
tunnel radius
|
10 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.57 |
1.67 |
28.7 |
-1.38 |
-0.67 |
16.9 |
87 |
 |
4 |
1 |
0 |
2 |
0 |
0 |
0 |
 |
DMS 403 B
|
 |
 |
2 |
 |
1.51 |
1.71 |
28.7 |
-1.74 |
-0.65 |
23.9 |
83 |
4 |
4 |
1 |
3 |
0 |
0 |
0 |
DMS 403 B
|
 |
3 |
 |
1.57 |
1.67 |
29.2 |
-1.65 |
-0.60 |
23.7 |
82 |
4 |
4 |
0 |
2 |
0 |
0 |
0 |
DMS 403 B
|
 |
4 |
 |
1.52 |
1.72 |
29.8 |
-1.57 |
-0.65 |
18.9 |
85 |
4 |
2 |
1 |
2 |
0 |
0 |
0 |
DMS 402 B DMS 403 B
|
 |
5 |
 |
1.18 |
1.21 |
19.5 |
-1.13 |
-0.17 |
22.0 |
76 |
1 |
2 |
3 |
2 |
4 |
0 |
0 |
DMS 402 A
|
 |
6 |
 |
1.17 |
1.19 |
26.4 |
-0.75 |
0.03 |
14.8 |
78 |
1 |
1 |
2 |
3 |
4 |
0 |
0 |
DMS 402 A
|
 |
7 |
 |
1.17 |
1.20 |
27.8 |
-1.14 |
-0.14 |
12.7 |
82 |
1 |
1 |
4 |
2 |
4 |
0 |
0 |
DMS 402 A
|
 |
8 |
 |
1.13 |
2.32 |
21.1 |
-2.02 |
-0.56 |
16.3 |
80 |
2 |
2 |
3 |
0 |
3 |
0 |
0 |
DMS 401 B
|
 |
9 |
 |
1.45 |
1.69 |
30.1 |
-0.12 |
-0.08 |
7.0 |
81 |
2 |
1 |
5 |
3 |
2 |
0 |
1 |
DMS 401 B
|
 |
10 |
 |
1.29 |
1.45 |
16.1 |
-0.27 |
0.09 |
18.7 |
73 |
2 |
1 |
0 |
3 |
2 |
2 |
0 |
DMS 401 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |