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PDBsum entry 7git

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 7git calculated with MOLE 2.0 PDB id
7git
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.58 1.86 22.1 -1.99 -0.64 25.9 80 4 4 1 2 0 0 0  DMS 403 B
2 1.60 1.86 23.6 -1.75 -0.66 22.6 81 4 4 1 3 0 0 0  DMS 403 B
3 1.60 1.86 25.8 -1.62 -0.61 20.8 81 4 3 2 2 0 0 0  DMS 402 B DMS 403 B
4 1.61 1.73 27.0 -1.78 -0.59 24.7 82 5 4 1 2 1 0 0  DMS 403 B
5 1.58 1.86 27.3 -1.58 -0.62 19.7 82 4 3 2 3 0 0 0  DMS 402 B DMS 403 B
6 1.62 1.74 27.4 -1.47 -0.59 21.0 82 5 4 1 2 1 0 0  DMS 403 B
7 1.62 1.74 27.6 -1.89 -0.63 23.2 76 4 3 0 1 1 0 0  DMS 403 B
8 1.60 1.72 28.0 -1.56 -0.64 19.6 76 4 3 0 1 1 0 0  DMS 403 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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