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PDBsum entry 7fud

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Pore analysis for: 7fud calculated with MOLE 2.0 PDB id
7fud
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.06 4.15 25.2 -1.64 -0.39 21.6 86 5 3 4 1 1 1 0  YP8 602 A
2 2.38 3.45 28.8 -1.86 -0.48 26.8 82 7 6 3 2 1 1 0  YP8 602 B
3 2.06 2.11 36.9 -2.08 -0.47 25.4 83 5 3 5 2 2 0 0  YP8 602 A
4 1.27 1.38 76.5 -2.08 -0.42 29.7 77 9 4 1 2 0 1 0  
5 1.28 1.39 83.2 -1.70 -0.35 26.3 83 9 6 5 3 1 1 0  YP8 602 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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