PDBsum entry 7ft4

Tunnel analysis for: 7ft4 calculated with

MOLE 2.0

PDB id

7ft4

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

17 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.14

1.37

16.4

0.75

0.09

3.5

84

0

1

1

5

2

1

0

2

1.16

1.37

17.8

-0.27

-0.37

7.3

86

1

1

1

2

1

0

0

3

1.16

1.37

19.0

0.03

-0.22

4.9

86

1

0

2

2

1

1

0

4

1.48

1.53

16.9

-1.45

-0.36

18.4

78

1

2

1

2

1

1

1

EDO 301 D

5

1.29

1.43

15.5

0.61

0.17

5.3

82

1

0

1

4

2

1

0

6

1.31

1.43

15.7

0.12

-0.25

6.8

84

2

1

1

2

1

0

0

SO4 304 D

7

1.28

1.43

24.7

0.07

0.05

9.2

82

2

1

1

4

2

0

0

8

1.44

1.58

18.2

-1.02

-0.37

11.3

82

2

0

2

1

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.