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PDBsum entry 7fid

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Pore analysis for: 7fid calculated with MOLE 2.0 PDB id
7fid
Pores calculated on whole structure Pores calculated excluding ligands

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33 pores, coloured by radius 32 pores, coloured by radius 32 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.35 1.35 26.1 -1.90 -0.53 28.1 80 2 4 2 2 0 0 0  UNK 5 S UNK 6 S UNK 7 S UNK 8 S
2 1.70 1.70 37.1 -1.89 -0.54 22.2 82 3 2 2 3 0 0 0  
3 1.93 2.86 75.8 -2.21 -0.70 23.7 84 7 7 5 3 0 0 0  
4 1.57 1.75 90.6 -2.48 -0.41 31.2 79 14 11 3 5 2 2 0  AGS 901 A
5 1.24 1.64 91.7 0.01 0.05 17.5 75 5 9 3 12 3 0 0  
6 1.23 1.56 92.4 -0.46 -0.10 20.5 75 5 10 1 10 3 0 0  UNK 5 S UNK 6 S UNK 7 S UNK 8 S
7 1.53 1.70 93.7 -2.12 -0.29 28.9 81 15 11 3 6 2 2 0  AGS 901 B
8 3.29 3.35 103.8 -2.13 -0.34 26.6 80 10 12 1 4 3 5 0  
9 1.81 2.03 106.9 -2.42 -0.67 26.1 84 10 8 9 4 0 0 0  
10 1.44 1.96 117.9 -0.33 0.16 18.1 82 9 4 4 17 4 2 0  
11 1.56 1.75 132.4 -2.04 -0.27 24.9 79 16 12 4 7 4 5 0  AGS 901 A
12 2.92 3.89 136.6 -2.05 -0.46 22.1 81 10 13 4 5 3 6 0  
13 1.18 1.31 152.2 -0.99 -0.16 19.5 78 10 13 4 19 4 1 0  
14 1.16 1.46 153.2 -0.41 -0.10 18.4 82 11 6 4 22 2 1 0  
15 1.21 2.35 160.9 -0.98 -0.20 17.3 79 7 12 5 17 3 3 0  
16 1.67 1.83 162.3 -2.00 -0.37 22.7 80 15 13 6 9 4 6 0  AGS 901 B
17 2.83 3.65 169.1 -2.05 -0.43 21.7 80 10 14 4 7 4 9 0  
18 1.18 1.31 166.0 -1.21 -0.26 18.5 78 11 12 5 15 4 2 0  UNK 5 S UNK 6 S UNK 7 S UNK 8 S
19 1.43 3.37 192.2 -2.05 -0.39 21.9 78 15 14 7 10 5 9 0  AGS 901 A
20 1.39 1.45 199.5 -1.07 -0.18 18.7 79 13 15 9 21 4 1 0  
21 1.24 1.63 201.0 -1.26 -0.33 15.4 80 12 13 10 14 3 4 0  UNK 4 S UNK 5 S UNK 6 S UNK 7 S
22 1.20 2.34 218.5 -0.48 -0.11 17.0 82 14 12 13 31 1 0 0  UNK 5 S UNK 6 S UNK 7 S UNK 8 S
23 1.92 2.90 236.8 -1.97 -0.43 23.3 80 24 18 8 10 4 9 0  UNK 5 S UNK 6 S UNK 7 S UNK 8 S UNK 9 S UNK 10 S
24 1.85 2.03 249.8 -1.76 -0.36 19.9 79 22 16 15 13 6 8 0  UNK 5 S UNK 6 S UNK 7 S UNK 8 S UNK 9 S UNK 10 S
25 1.96 3.15 262.6 -1.71 -0.39 21.0 79 23 20 10 12 6 8 0  UNK 5 S UNK 6 S UNK 7 S UNK 8 S UNK 9 S UNK 10 S
26 1.31 1.74 314.1 -2.00 -0.40 24.3 79 30 27 10 16 7 11 0  ADP 901 F
27 1.21 2.43 313.6 -0.89 -0.12 20.1 80 26 22 9 36 5 9 0  UNK 8 S UNK 9 S UNK 10 S
28 1.23 2.22 323.1 -1.88 -0.34 25.7 79 34 25 12 19 7 8 0  ADP 901 F
29 1.21 1.96 354.2 -1.64 -0.27 22.0 79 29 26 13 23 9 8 0  ADP 901 F
30 1.39 1.40 46.6 -1.35 -0.40 16.9 74 5 3 1 3 1 3 0  
31 1.39 1.40 83.3 -0.31 -0.08 9.5 76 3 2 2 7 4 0 0  
32 1.40 1.41 88.9 -0.72 -0.06 12.5 73 5 2 2 7 5 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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