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PDBsum entry 7f9c

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 7f9c calculated with MOLE 2.0 PDB id
7f9c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.46 1.53 20.2 -0.87 0.04 21.6 69 5 3 0 4 2 3 1  
2 1.23 1.50 34.6 -1.31 -0.44 19.4 77 5 7 1 3 5 0 2  1UI 1901 B CA 1903 B
3 1.46 1.49 22.8 0.44 -0.02 8.6 81 2 3 0 8 2 3 0  
4 1.45 2.82 25.5 0.50 -0.02 9.6 77 2 4 0 10 2 3 0  
5 1.50 1.80 16.1 -1.86 -0.35 20.6 65 2 4 0 0 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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