PDBsum entry 7f8d Go to PDB code:  Pore analysis for: 7f8d calculated with MOLE 2.0 PDB id 7f8d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.22 72.0 -1.54 -0.42 22.4 76 11 2 0 4 2 1 0   2 1.37 1.48 34.6 -0.83 -0.28 12.8 80 4 2 2 6 2 1 0  NAD 400 B 3 1.40 2.79 37.8 -2.32 -0.13 30.1 67 4 2 0 4 2 2 0   4 1.41 2.64 53.0 -2.56 -0.44 34.7 77 6 5 0 3 1 1 0   5 1.74 1.72 61.0 -2.00 -0.38 31.1 81 7 5 0 6 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.