spacer
spacer

PDBsum entry 7eyc

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 7eyc calculated with MOLE 2.0 PDB id
7eyc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.44 1.49 25.5 -0.16 0.36 11.7 80 1 2 3 3 4 0 0  ALY 6 Q
2 1.44 1.48 26.7 -0.22 0.25 12.7 73 1 2 2 4 4 0 0  ALY 6 Q
3 1.09 1.09 18.5 0.47 -0.32 3.7 82 0 2 2 5 1 1 0  
4 1.09 1.09 21.5 0.54 -0.28 3.9 79 0 1 1 5 1 1 0  
5 1.28 2.56 21.5 -0.92 -0.77 2.3 105 0 0 8 2 0 0 0  
6 1.20 1.35 21.7 -0.87 -0.71 2.3 101 0 0 8 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer