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PDBsum entry 7elm
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Pore analysis for: 7elm calculated with MOLE 2.0
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PDB id
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7elm
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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26 pores,
coloured by radius |
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26 pores,
coloured by radius
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26 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.88 |
1.88 |
27.0 |
-0.40 |
-0.80 |
3.4 |
0 |
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0 |
0 |
0 |
0 |
0 |
0 |
0 |
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2 |
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1.99 |
2.00 |
29.2 |
0.10 |
-0.15 |
9.4 |
86 |
3 |
1 |
2 |
4 |
1 |
0 |
0 |
G 32 J C 34 J U 35 J A 36 J
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3 |
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1.41 |
1.82 |
38.3 |
-1.54 |
-0.57 |
23.6 |
85 |
5 |
3 |
1 |
4 |
0 |
0 |
0 |
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4 |
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1.75 |
1.75 |
53.3 |
-0.48 |
-0.80 |
4.6 |
79 |
1 |
1 |
0 |
0 |
0 |
0 |
0 |
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5 |
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1.95 |
1.96 |
57.0 |
-0.44 |
-0.80 |
4.0 |
86 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
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6 |
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2.51 |
2.51 |
67.0 |
-0.79 |
-0.33 |
14.9 |
85 |
7 |
2 |
5 |
6 |
2 |
0 |
0 |
C 20 J U 22 J G 23 J C 28 J C 29 J G 30 J C 34 J U 35 J A 36 J
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7 |
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1.71 |
1.88 |
79.9 |
-1.15 |
-0.43 |
16.5 |
73 |
5 |
3 |
3 |
2 |
2 |
0 |
1 |
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8 |
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2.20 |
2.20 |
91.2 |
-0.70 |
-0.48 |
11.0 |
85 |
5 |
2 |
4 |
5 |
1 |
1 |
0 |
G 32 T C 34 T U 35 T A 36 T
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9 |
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1.78 |
1.89 |
92.4 |
-0.77 |
-0.44 |
12.5 |
72 |
6 |
3 |
3 |
3 |
2 |
0 |
1 |
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10 |
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1.94 |
1.95 |
112.3 |
-1.27 |
-0.65 |
12.9 |
77 |
3 |
5 |
4 |
2 |
2 |
0 |
0 |
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11 |
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1.59 |
2.11 |
117.0 |
-1.75 |
-0.53 |
19.9 |
84 |
9 |
6 |
7 |
3 |
2 |
1 |
0 |
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12 |
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2.21 |
2.26 |
115.0 |
-1.07 |
-0.68 |
10.5 |
76 |
3 |
4 |
4 |
2 |
2 |
0 |
0 |
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13 |
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1.78 |
1.78 |
117.1 |
-0.71 |
-0.40 |
11.5 |
76 |
7 |
4 |
5 |
4 |
2 |
1 |
0 |
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14 |
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2.40 |
2.40 |
154.1 |
-1.29 |
-0.54 |
18.6 |
81 |
8 |
11 |
6 |
9 |
4 |
0 |
0 |
C 20 J U 22 J G 23 J
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15 |
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2.49 |
2.52 |
158.3 |
-1.39 |
-0.58 |
20.6 |
81 |
11 |
12 |
4 |
11 |
2 |
0 |
0 |
C 20 J U 22 J G 23 J
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16 |
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1.75 |
1.95 |
174.3 |
-0.97 |
-0.37 |
15.1 |
81 |
13 |
6 |
9 |
9 |
3 |
1 |
1 |
G 32 T C 34 T U 35 T A 36 T
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17 |
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1.57 |
2.49 |
186.6 |
-1.59 |
-0.42 |
20.2 |
86 |
19 |
8 |
10 |
8 |
2 |
3 |
0 |
C 28 J C 29 J G 30 J C 34 J U 35 J A 36 J
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18 |
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1.56 |
1.56 |
180.0 |
-1.14 |
-0.64 |
12.2 |
81 |
8 |
7 |
6 |
4 |
4 |
1 |
0 |
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19 |
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1.20 |
1.45 |
182.5 |
-0.45 |
-0.21 |
11.1 |
75 |
9 |
4 |
6 |
12 |
5 |
1 |
2 |
G 41 T U 42 T U 43 T C 58 T A 59 T G 60 T
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20 |
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2.10 |
2.25 |
196.6 |
-1.73 |
-0.54 |
23.4 |
80 |
12 |
15 |
8 |
13 |
4 |
0 |
0 |
C 20 J U 22 J G 23 J
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21 |
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1.72 |
1.72 |
222.0 |
-1.23 |
-0.45 |
11.7 |
90 |
12 |
6 |
19 |
11 |
4 |
3 |
0 |
U 9 T U 10 T C 11 T A 12 T G 15 T C 16 T G 17 T G 18 T U 22 T G 23 T
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22 |
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1.94 |
2.11 |
224.7 |
-1.44 |
-0.49 |
19.3 |
88 |
18 |
9 |
12 |
11 |
3 |
2 |
0 |
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23 |
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1.98 |
2.05 |
240.2 |
-1.51 |
-0.52 |
20.5 |
87 |
21 |
11 |
11 |
13 |
1 |
2 |
0 |
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24 |
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1.52 |
1.56 |
248.9 |
-1.07 |
-0.34 |
16.2 |
88 |
21 |
8 |
19 |
18 |
2 |
5 |
0 |
C 28 J C 29 J G 30 J C 34 J U 35 J A 36 J G 32 T C 34 T
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25 |
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1.62 |
1.62 |
306.9 |
-1.22 |
-0.50 |
15.3 |
90 |
19 |
12 |
19 |
17 |
2 |
4 |
0 |
C 28 J C 29 J G 30 J C 34 J U 35 J A 36 J U 9 T U 10 T C 11 T A 12 T G 15 T C 16 T G 17 T G 18 T
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26 |
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1.54 |
1.61 |
367.2 |
-1.43 |
-0.44 |
20.1 |
85 |
29 |
17 |
20 |
21 |
4 |
3 |
0 |
G 32 T C 34 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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