spacer
spacer

PDBsum entry 7ejk

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 7ejk calculated with MOLE 2.0 PDB id
7ejk
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.94 66.0 0.45 0.25 7.3 77 1 3 7 13 7 1 1  J5C 501 R
2 1.22 1.40 107.7 -0.81 -0.28 15.0 82 8 6 9 9 6 3 3  
3 1.43 1.88 17.8 0.20 0.10 14.4 83 1 3 0 5 2 0 0  
4 1.19 1.59 28.3 1.11 0.53 10.8 75 2 1 0 7 2 0 0  
5 1.26 1.92 18.2 -0.75 0.03 3.5 66 1 0 2 2 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer