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PDBsum entry 7e8s

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 7e8s calculated with MOLE 2.0 PDB id
7e8s
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 2.98 39.8 0.38 0.25 13.0 77 3 3 3 10 2 0 0  
2 1.16 1.38 106.3 0.40 0.18 8.1 76 5 4 0 16 6 2 1  
3 1.18 1.39 195.2 -0.31 -0.02 14.1 77 9 14 9 28 8 1 2  
4 1.51 1.58 194.1 -0.48 -0.09 14.5 85 9 7 14 13 6 5 0  
5 1.77 2.04 205.4 -1.29 -0.30 17.4 79 12 10 13 14 10 3 0  
6 1.36 1.44 211.8 -1.34 -0.42 20.2 75 12 11 7 12 8 6 0  
7 1.26 1.43 231.9 -0.58 -0.25 12.2 79 10 11 14 23 9 2 1  
8 1.20 1.48 295.7 -0.40 -0.16 11.0 82 18 19 26 31 15 5 0  
9 1.53 1.72 307.7 -0.58 -0.23 14.1 83 24 17 22 38 9 4 0  
10 1.01 1.58 325.0 -1.46 -0.51 16.2 83 12 19 16 17 10 8 0  
11 1.90 2.10 330.5 -0.82 -0.29 16.2 83 24 20 20 30 9 4 0  
12 1.42 1.92 334.8 -1.21 -0.32 18.2 78 20 20 13 24 12 6 1  
13 1.52 1.90 341.6 -1.07 -0.30 18.1 80 19 20 14 30 11 4 0  
14 1.39 1.62 364.4 -1.29 -0.35 20.1 79 20 24 12 22 11 4 0  
15 1.18 1.16 411.4 -1.24 -0.34 19.0 79 23 24 20 29 12 8 1  
16 1.40 1.50 404.4 -0.75 -0.19 15.3 80 23 19 20 37 14 6 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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