PDBsum entry 7dgd Go to PDB code:  Pore analysis for: 7dgd calculated with MOLE 2.0 PDB id 7dgd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 1.59 117.4 -2.11 -0.50 24.5 86 10 9 8 4 1 1 0   2 1.95 2.00 25.7 -1.45 -0.07 22.9 72 5 0 0 3 3 1 1   3 1.88 2.01 33.9 -0.91 0.51 13.1 74 5 0 0 3 4 0 0   4 1.33 2.46 59.9 1.78 0.61 2.2 83 0 1 4 8 4 1 1   5 1.40 1.71 63.7 2.08 0.68 2.0 80 0 1 3 10 4 1 1   6 1.52 2.52 72.8 0.97 0.55 5.1 76 2 0 1 11 7 0 1   7 1.23 1.55 84.7 1.84 0.45 4.0 86 2 1 5 21 1 0 0   8 1.25 2.32 85.9 1.78 0.52 5.5 84 4 1 4 18 1 0 0   9 1.38 2.40 96.5 1.46 0.58 8.2 78 2 2 2 11 7 0 1   10 1.34 1.34 116.5 1.23 0.50 3.6 73 1 1 4 10 10 0 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.