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PDBsum entry 7de1

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 7de1 calculated with MOLE 2.0 PDB id
7de1
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.40 17.0 0.86 0.22 7.2 74 2 1 2 3 2 0 0  
2 1.17 1.40 18.1 0.06 -0.03 4.8 77 1 2 4 3 2 0 0  
3 1.25 1.28 15.9 0.31 0.11 2.7 75 0 1 4 3 2 0 0  
4 1.27 1.51 16.0 1.08 0.36 5.4 75 2 1 3 3 2 0 0  PEG 403 B
5 1.26 1.51 17.2 0.61 0.21 3.0 76 1 1 4 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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