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PDBsum entry 7d76

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7d76 calculated with MOLE 2.0 PDB id
7d76
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.67 1.99 47.3 -2.02 -0.52 27.0 80 7 5 2 2 1 0 0  
2 1.26 1.28 85.9 -0.17 0.07 11.0 78 1 6 3 9 5 1 0  PLM 401 A PLM 603 R
3 1.28 1.29 88.3 0.81 0.43 2.7 68 1 1 3 13 12 1 0  PLM 401 A PLM 603 R GXR 604 R
4 1.30 1.30 97.5 -0.22 0.06 11.2 79 5 4 5 11 6 1 0  PLM 401 A PLM 603 R
5 1.55 1.68 106.0 0.00 0.26 8.7 69 2 5 4 8 11 2 0  GXR 604 R
6 1.64 1.78 121.6 -0.20 0.21 11.0 72 8 4 6 11 12 2 0  GXR 604 R
7 2.48 4.22 35.4 -0.93 -0.36 14.2 85 5 2 4 3 1 1 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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