PDBsum entry 7d3s

Pore analysis for: 7d3s calculated with

MOLE 2.0

PDB id

7d3s

Pores calculated on whole structure

Pores calculated excluding ligands

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6 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.60

3.18

43.8

-2.15

-0.37

35.1

77

6

5

2

2

1

0

0

2

3.27

4.07

46.9

-2.36

-0.38

33.0

76

6

3

2

3

1

0

1

3

1.21

1.54

48.1

-0.63

-0.13

15.8

81

4

2

1

4

2

1

0

4

1.22

1.49

60.1

-1.18

-0.24

17.2

82

7

2

3

4

4

1

0

5

1.28

1.61

80.1

-1.20

-0.45

14.9

89

6

4

7

7

2

1

0

6

1.24

3.87

113.7

-1.24

-0.49

15.7

83

7

6

8

6

4

2

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.