 |
PDBsum entry 7cx7
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 7cx7 calculated with MOLE 2.0
|
PDB id
|
|
|
|
7cx7
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
16 pores,
coloured by radius |
 |
24 pores,
coloured by radius
|
24 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.20 |
1.20 |
25.8 |
-1.72 |
-0.71 |
22.5 |
86 |
 |
5 |
4 |
0 |
0 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
3.70 |
4.20 |
39.0 |
-2.83 |
-0.51 |
34.4 |
84 |
7 |
6 |
2 |
1 |
0 |
2 |
0 |
|
 |
3 |
 |
1.78 |
1.79 |
41.6 |
-2.14 |
-0.58 |
24.6 |
72 |
6 |
2 |
0 |
1 |
1 |
2 |
0 |
MPD 501 B
|
 |
4 |
 |
4.15 |
5.04 |
41.9 |
-1.62 |
-0.64 |
24.1 |
82 |
6 |
5 |
1 |
3 |
1 |
0 |
0 |
|
 |
5 |
 |
4.04 |
4.26 |
54.8 |
-1.81 |
-0.59 |
24.7 |
83 |
7 |
6 |
2 |
3 |
0 |
1 |
0 |
|
 |
6 |
 |
1.68 |
3.22 |
61.7 |
-1.73 |
-0.48 |
18.8 |
76 |
7 |
3 |
2 |
5 |
2 |
2 |
0 |
MPD 502 E
|
 |
7 |
 |
1.82 |
2.04 |
62.0 |
-1.65 |
-0.45 |
23.2 |
81 |
7 |
6 |
2 |
4 |
3 |
1 |
0 |
MPD 501 C
|
 |
8 |
 |
1.62 |
1.91 |
67.5 |
-1.56 |
-0.54 |
20.0 |
83 |
8 |
6 |
4 |
4 |
0 |
3 |
0 |
|
 |
9 |
 |
1.71 |
2.55 |
72.8 |
-1.75 |
-0.55 |
18.0 |
77 |
9 |
2 |
3 |
1 |
2 |
2 |
0 |
MPD 502 F
|
 |
10 |
 |
1.00 |
2.85 |
81.6 |
-2.30 |
-0.68 |
31.6 |
86 |
8 |
9 |
5 |
5 |
1 |
0 |
0 |
|
 |
11 |
 |
1.66 |
1.93 |
89.0 |
-1.65 |
-0.51 |
20.1 |
81 |
8 |
8 |
6 |
5 |
1 |
4 |
0 |
MPD 502 E
|
 |
12 |
 |
1.57 |
1.93 |
89.6 |
-2.02 |
-0.54 |
26.0 |
82 |
13 |
9 |
2 |
3 |
1 |
2 |
0 |
|
 |
13 |
 |
1.00 |
2.85 |
95.0 |
-1.34 |
-0.47 |
19.3 |
82 |
8 |
5 |
3 |
10 |
4 |
1 |
0 |
MPD 501 C
|
 |
14 |
 |
1.66 |
1.68 |
99.6 |
-1.87 |
-0.55 |
18.9 |
80 |
9 |
4 |
6 |
2 |
3 |
2 |
0 |
MPD 502 F
|
 |
15 |
 |
1.81 |
1.97 |
102.3 |
-1.72 |
-0.58 |
23.4 |
85 |
8 |
9 |
6 |
6 |
3 |
1 |
0 |
MPD 501 C
|
 |
16 |
 |
1.60 |
1.91 |
109.5 |
-2.27 |
-0.57 |
27.7 |
81 |
17 |
10 |
4 |
5 |
0 |
4 |
0 |
MPD 501 B
|
 |
17 |
 |
1.00 |
2.87 |
112.3 |
-2.01 |
-0.61 |
27.2 |
82 |
14 |
12 |
2 |
9 |
1 |
1 |
0 |
|
 |
18 |
 |
1.82 |
1.98 |
121.9 |
-1.75 |
-0.54 |
23.8 |
82 |
15 |
11 |
3 |
9 |
3 |
2 |
0 |
MPD 501 C
|
 |
19 |
 |
1.61 |
1.92 |
134.1 |
-2.23 |
-0.57 |
26.9 |
85 |
15 |
14 |
8 |
2 |
2 |
2 |
0 |
|
 |
20 |
 |
1.75 |
1.76 |
138.5 |
-1.86 |
-0.59 |
23.2 |
83 |
17 |
13 |
5 |
6 |
2 |
1 |
0 |
|
 |
21 |
 |
1.00 |
2.95 |
147.5 |
-1.86 |
-0.59 |
24.6 |
84 |
18 |
14 |
5 |
9 |
2 |
2 |
0 |
|
 |
22 |
 |
1.73 |
1.93 |
154.9 |
-1.77 |
-0.54 |
23.3 |
82 |
18 |
11 |
5 |
8 |
4 |
3 |
0 |
MPD 501 C
|
 |
23 |
 |
1.00 |
2.90 |
155.0 |
-1.94 |
-0.58 |
24.7 |
82 |
19 |
13 |
5 |
9 |
1 |
4 |
0 |
MPD 501 B
|
 |
24 |
 |
1.71 |
1.94 |
167.5 |
-1.81 |
-0.53 |
23.0 |
82 |
19 |
13 |
7 |
10 |
3 |
6 |
0 |
MPD 501 B MPD 501 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |