PDBsum entry 7clz

Hydrolase

PDB id: 7clz

Contents

Protein chains

293 a.a.

Ligands

DY9 ×3

MLT ×4

BO3 ×2

Metals

_NA ×2

Waters ×354

References listed in PDB file

Key reference

• Title: Mutation of an atypical oxirane oxyanion hole improves regioselectivity of the α/β-Fold epoxide hydrolase alp1u.
• Authors: L.Zhang, B.C.De, W.Zhang, A.Mándi, Z.Fang, C.Yang, Y.Zhu, T.Kurtán, C.Zhang.
• Ref.: J Biol Chem, 2020, 295, 16987-16997. [DOI no: 10.1074/jbc.RA120.015563]
• PubMed id: 33004437

Abstract

Epoxide hydrolases (EHs) have been characterized and engineered as biocatalysts that convert epoxides to valuable chiral vicinal diol precursors of drugs and bioactive compounds. Nonetheless, the regioselectivity control of the epoxide ring opening by EHs remains challenging. Alp1U is an α/β-fold EH that exhibits poor regioselectivity in the epoxide hydrolysis of fluostatin C (compound 1) and produces a pair of stereoisomers. Herein, we established the absolute configuration of the two stereoisomeric products and determined the crystal structure of Alp1U. A Trp-186/Trp-187/Tyr-247 oxirane oxygen hole was identified in Alp1U that replaced the canonical Tyr/Tyr pair in α/β-EHs. Mutation of residues in the atypical oxirane oxygen hole of Alp1U improved the regioselectivity for epoxide hydrolysis on 1. The single site Y247F mutation led to highly regioselective (98%) attack at C-3 of 1, whereas the double mutation W187F/Y247F resulted in regioselective (94%) nucleophilic attack at C-2. Furthermore, single-crystal X-ray structures of the two regioselective Alp1U variants in complex with 1 were determined. These findings allowed insights into the reaction details of Alp1U and provided a new approach for engineering regioselective epoxide hydrolases.