spacer
spacer

PDBsum entry 7chc

Go to PDB code: 
Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 7chc calculated with MOLE 2.0 PDB id
7chc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 1.77 19.7 -0.92 -0.21 11.6 68 0 1 0 2 1 4 0  
2 1.68 1.75 25.1 -0.90 -0.44 11.4 75 0 1 0 2 1 4 0  
3 1.69 1.77 27.3 -0.12 -0.01 8.6 73 1 1 0 2 1 3 0  
4 1.60 1.67 29.3 -0.65 -0.28 6.3 72 1 1 2 3 2 3 0  
5 1.47 1.47 18.5 -0.94 -0.74 4.2 103 1 0 7 1 0 0 0  
6 1.10 2.38 29.4 0.48 -0.22 1.7 91 0 0 7 5 2 0 0  
7 1.14 1.46 17.7 1.19 0.44 1.5 72 0 0 2 5 4 0 1  
8 1.20 1.28 15.9 0.90 0.14 8.0 76 0 1 0 4 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer