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PDBsum entry 7ccc

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 7ccc calculated with MOLE 2.0 PDB id
7ccc
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.26 3.64 25.8 -1.41 -0.09 12.8 78 2 3 2 5 2 1 0  
2 1.84 3.44 27.7 -2.06 -0.62 24.6 84 3 4 2 1 1 0 0  
3 1.61 3.65 41.7 -1.74 -0.51 23.2 89 4 3 3 3 1 0 0  
4 3.24 4.58 44.2 -1.12 -0.26 22.4 81 4 8 1 7 2 1 0  
5 2.18 4.41 47.9 -1.61 -0.27 26.1 81 7 6 1 3 2 0 0  
6 3.03 5.70 54.3 -1.99 -0.45 28.4 81 5 7 5 4 2 1 1  
7 1.94 1.99 69.8 -1.87 -0.57 24.1 86 6 10 7 5 0 1 0  
8 2.36 3.45 75.4 -1.39 -0.21 23.2 83 5 7 4 8 4 2 1  
9 1.83 3.50 78.4 -1.52 -0.21 23.1 77 5 10 2 6 6 1 1  
10 2.66 3.11 80.8 -1.65 -0.56 19.8 85 6 6 4 5 2 0 0  HIC 73 E
11 1.95 1.99 82.5 -1.47 -0.50 21.2 85 7 12 8 9 2 0 0  
12 2.25 2.25 87.7 -1.67 -0.57 20.5 83 8 12 5 7 2 0 0  
13 1.48 1.59 89.5 -1.18 -0.36 16.7 89 5 5 10 6 1 2 0  
14 2.00 3.10 93.5 -2.02 -0.53 25.3 80 9 12 5 6 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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