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PDBsum entry 7bvq

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 7bvq calculated with MOLE 2.0 PDB id
7bvq
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 2.26 22.1 0.31 -0.15 2.0 85 0 0 5 6 3 1 0  
2 1.23 2.22 35.7 0.12 -0.07 7.1 88 4 2 6 8 5 0 0  CAU 1401 B
3 1.25 2.06 44.3 0.64 0.46 4.2 70 0 3 7 6 14 0 3  CAU 1401 B
4 1.24 2.32 57.1 -0.21 0.09 11.7 82 3 3 10 9 10 1 0  CAU 1401 B 1WV 1405 B
5 1.36 1.42 33.7 1.05 0.49 6.6 73 1 3 3 4 9 0 3  CAU 1402 A NA 1410 A
6 1.47 1.71 33.7 0.54 0.31 8.9 84 4 0 5 3 7 0 0  CAU 1402 A CIT 1411 A
7 1.46 1.71 36.6 0.58 0.37 15.3 77 3 4 3 5 8 1 0  CAU 1402 A
8 1.46 1.71 37.0 0.42 0.33 9.6 78 3 3 4 8 8 1 1  CAU 1402 A 1WV 1409 A CIT 1412 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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