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PDBsum entry 7b5c

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 7b5c calculated with MOLE 2.0 PDB id
7b5c
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.60 3.15 63.4 -1.11 0.00 18.9 77 5 3 2 10 7 2 0  
2 1.39 1.44 92.3 -0.64 0.13 13.6 78 5 5 4 10 7 2 0  
3 1.41 1.45 101.8 -1.17 0.01 20.1 76 7 7 4 8 7 3 0  
4 2.43 2.54 104.4 -1.79 -0.31 27.1 79 16 10 3 6 3 0 0  
5 1.38 1.40 118.0 -0.82 0.08 16.6 78 8 7 5 11 6 4 0  
6 2.43 2.57 142.2 -0.34 0.02 14.4 80 10 7 3 15 9 1 0  
7 1.31 1.31 190.0 -0.64 -0.05 17.0 80 15 10 5 19 10 2 1  
8 2.46 2.48 185.4 -0.69 -0.04 18.3 80 14 11 4 15 11 1 0  
9 1.43 1.52 243.5 -0.39 0.14 14.2 79 15 11 7 24 14 3 0  
10 1.40 1.44 274.3 -0.62 0.07 16.7 79 19 14 6 23 15 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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