spacer
spacer

PDBsum entry 7auh

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 7auh calculated with MOLE 2.0 PDB id
7auh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.82 1.82 17.5 -1.68 -0.59 20.6 86 2 1 0 0 1 0 0  
2 1.44 1.50 19.7 -1.12 -0.65 15.4 80 1 3 0 1 1 1 0  
3 1.60 1.60 16.6 -0.15 -0.43 4.8 91 1 0 3 0 2 0 0  4D6 602 A
4 1.30 1.30 18.2 -0.75 -0.61 10.2 87 1 1 3 2 1 0 0  
5 1.33 1.44 20.2 0.07 -0.30 6.3 86 1 1 2 1 2 0 0  4D6 602 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer