 |
PDBsum entry 7anm
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 7anm calculated with MOLE 2.0
|
PDB id
|
|
|
|
7anm
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
24 pores,
coloured by radius |
 |
24 pores,
coloured by radius
|
24 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.83 |
1.82 |
26.9 |
0.61 |
-0.10 |
2.4 |
89 |
 |
0 |
1 |
3 |
5 |
1 |
1 |
0 |
 |
|
 |
 |
2 |
 |
1.89 |
2.26 |
38.5 |
0.05 |
-0.01 |
8.6 |
87 |
1 |
2 |
3 |
7 |
2 |
2 |
0 |
|
 |
3 |
 |
1.89 |
2.27 |
41.4 |
0.45 |
-0.08 |
5.3 |
89 |
1 |
2 |
3 |
8 |
1 |
2 |
0 |
|
 |
4 |
 |
1.54 |
2.81 |
42.2 |
-0.25 |
0.01 |
19.6 |
74 |
1 |
5 |
1 |
8 |
2 |
0 |
0 |
|
 |
5 |
 |
1.98 |
2.49 |
42.4 |
-0.37 |
-0.19 |
11.9 |
82 |
3 |
5 |
5 |
7 |
2 |
1 |
0 |
|
 |
6 |
 |
2.53 |
2.53 |
46.9 |
-0.54 |
-0.46 |
11.3 |
92 |
0 |
3 |
3 |
6 |
0 |
1 |
0 |
|
 |
7 |
 |
1.71 |
1.70 |
47.0 |
-1.47 |
-0.43 |
14.4 |
93 |
3 |
4 |
7 |
3 |
1 |
0 |
0 |
|
 |
8 |
 |
2.47 |
4.55 |
51.9 |
-1.36 |
-0.31 |
11.8 |
80 |
4 |
8 |
6 |
2 |
4 |
2 |
0 |
|
 |
9 |
 |
1.50 |
1.50 |
56.2 |
-0.26 |
-0.15 |
6.0 |
84 |
1 |
5 |
4 |
7 |
3 |
2 |
0 |
|
 |
10 |
 |
1.47 |
1.67 |
58.3 |
-0.59 |
-0.28 |
9.6 |
82 |
2 |
5 |
5 |
5 |
4 |
1 |
0 |
|
 |
11 |
 |
2.52 |
2.52 |
61.6 |
-1.01 |
-0.31 |
13.1 |
82 |
4 |
5 |
6 |
4 |
4 |
4 |
0 |
|
 |
12 |
 |
1.97 |
2.11 |
66.4 |
-0.28 |
-0.09 |
6.5 |
83 |
1 |
6 |
7 |
7 |
4 |
2 |
0 |
|
 |
13 |
 |
2.04 |
2.03 |
71.7 |
-0.79 |
-0.31 |
8.3 |
86 |
4 |
3 |
11 |
8 |
3 |
5 |
0 |
|
 |
14 |
 |
1.51 |
2.84 |
72.5 |
-1.31 |
-0.43 |
20.2 |
88 |
5 |
9 |
7 |
7 |
1 |
0 |
0 |
|
 |
15 |
 |
1.93 |
1.99 |
75.4 |
-0.57 |
-0.20 |
10.6 |
84 |
4 |
5 |
8 |
8 |
4 |
5 |
0 |
|
 |
16 |
 |
1.51 |
2.78 |
80.5 |
-0.87 |
-0.27 |
19.2 |
85 |
5 |
7 |
6 |
13 |
2 |
0 |
0 |
|
 |
17 |
 |
1.46 |
1.49 |
85.6 |
-0.78 |
-0.28 |
10.6 |
82 |
5 |
9 |
9 |
8 |
4 |
4 |
0 |
|
 |
18 |
 |
1.91 |
2.28 |
85.5 |
-0.51 |
-0.26 |
6.7 |
87 |
4 |
3 |
13 |
12 |
3 |
6 |
0 |
|
 |
19 |
 |
1.44 |
1.69 |
86.4 |
-0.64 |
-0.30 |
13.2 |
84 |
4 |
7 |
7 |
9 |
3 |
4 |
0 |
|
 |
20 |
 |
1.46 |
1.64 |
116.9 |
-0.30 |
-0.25 |
9.1 |
87 |
2 |
8 |
6 |
9 |
4 |
4 |
0 |
|
 |
21 |
 |
1.36 |
2.81 |
175.6 |
-0.97 |
-0.30 |
16.9 |
85 |
9 |
11 |
9 |
18 |
6 |
0 |
0 |
|
 |
22 |
 |
1.44 |
1.44 |
42.2 |
-0.80 |
-0.34 |
15.1 |
89 |
6 |
1 |
4 |
6 |
0 |
0 |
0 |
|
 |
23 |
 |
1.29 |
1.53 |
70.6 |
-0.85 |
-0.30 |
16.8 |
82 |
8 |
3 |
5 |
10 |
0 |
1 |
0 |
|
 |
24 |
 |
1.17 |
1.17 |
27.7 |
-0.39 |
-0.04 |
13.8 |
75 |
1 |
2 |
0 |
5 |
3 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |