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PDBsum entry 7ad6

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Pore analysis for: 7ad6 calculated with MOLE 2.0 PDB id
7ad6
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.58 28.1 -1.21 -0.09 17.4 78 2 3 3 5 2 1 0  
2 2.13 4.20 28.8 -1.98 -0.31 19.1 77 3 4 4 3 1 0 0  
3 2.58 2.66 30.5 -1.69 -0.39 19.6 78 2 4 1 1 3 1 0  
4 1.39 1.73 36.4 -0.30 0.17 6.7 72 2 1 3 8 4 2 0  
5 1.61 2.79 36.9 -0.59 -0.44 13.8 90 1 3 4 7 1 0 0  
6 1.99 2.13 42.9 -0.60 -0.33 18.5 80 4 3 2 3 0 1 0  
7 1.41 1.41 43.4 -0.60 -0.21 5.6 85 1 0 3 3 1 1 0  
8 3.01 3.27 43.9 -1.27 -0.56 21.3 83 3 5 1 3 0 2 0  
9 1.54 1.64 47.1 -1.87 -0.34 19.2 78 4 5 5 3 1 0 0  
10 1.38 1.59 53.1 -0.90 -0.05 15.9 77 4 4 4 6 4 2 0  
11 1.87 3.54 55.2 -2.03 -0.42 26.1 78 8 5 5 3 1 2 0  
12 1.38 1.39 58.6 -0.15 0.05 5.9 73 4 2 4 10 5 3 0  
13 1.41 1.64 62.8 -0.88 -0.07 18.1 78 3 6 4 6 4 2 0  
14 1.39 1.36 68.4 -0.26 0.01 9.3 72 3 4 3 10 5 3 0  
15 1.41 1.63 71.3 -1.10 -0.12 18.4 74 2 5 3 5 4 2 0  
16 1.92 3.59 74.7 -2.15 -0.56 26.0 83 12 9 7 4 1 4 0  
17 1.33 2.14 77.3 0.43 0.05 14.1 85 4 4 3 11 3 0 0  
18 2.24 2.27 154.1 -1.37 -0.36 19.7 83 14 13 12 14 9 5 0  
19 2.24 2.25 175.8 -1.25 -0.27 20.2 83 17 14 14 16 10 6 0  
20 1.38 2.09 194.2 -1.23 -0.28 21.5 83 15 15 8 14 7 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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