 |
PDBsum entry 7a9c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 7a9c calculated with  MOLE 2.0
|
PDB id
|
|
|
|
7a9c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.05 |
2.24 |
35.8 |
0.34 |
0.26 |
15.0 |
74 |
|
3 |
5 |
1 |
8 |
3 |
0 |
0 |
|
|
 |
|
2 |
 |
1.04 |
1.89 |
38.0 |
-0.24 |
0.11 |
7.7 |
65 |
3 |
1 |
4 |
2 |
5 |
0 |
2 |
|
|
3 |
 |
1.07 |
1.87 |
38.8 |
1.09 |
0.43 |
7.4 |
75 |
2 |
3 |
2 |
7 |
4 |
0 |
0 |
|
 |
4 |
 |
1.03 |
1.86 |
49.5 |
-1.04 |
-0.16 |
17.0 |
72 |
6 |
4 |
4 |
3 |
5 |
0 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program