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PDBsum entry 7a7c

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 7a7c calculated with MOLE 2.0 PDB id
7a7c
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.51 1.67 45.3 -2.21 -0.40 22.8 73 5 4 3 1 2 4 0  
2 1.07 1.07 49.8 -1.61 -0.05 23.7 75 7 3 3 4 4 1 0  
3 1.50 1.68 68.5 -1.36 -0.14 12.9 73 5 2 4 4 4 5 0  
4 1.43 1.57 74.5 -1.23 -0.20 15.5 78 8 3 4 6 4 4 0  HEM 801 B
5 1.17 2.59 75.2 -1.25 -0.39 15.0 81 8 5 7 5 3 2 0  
6 1.40 1.54 80.9 -1.86 -0.22 20.5 71 9 4 2 4 4 7 0  HEM 801 B
7 1.23 1.23 88.1 0.04 -0.20 9.3 88 5 4 5 10 1 1 0  
8 1.24 2.41 119.0 -1.13 -0.21 16.9 81 15 6 7 11 5 3 0  HEM 801 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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