 |
PDBsum entry 7a7c
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 7a7c calculated with MOLE 2.0
|
PDB id
|
|
|
|
7a7c
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
5 pores,
coloured by radius |
 |
8 pores,
coloured by radius
|
8 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.51 |
1.67 |
45.3 |
-2.21 |
-0.40 |
22.8 |
73 |
 |
5 |
4 |
3 |
1 |
2 |
4 |
0 |
 |
|
 |
 |
2 |
 |
1.07 |
1.07 |
49.8 |
-1.61 |
-0.05 |
23.7 |
75 |
7 |
3 |
3 |
4 |
4 |
1 |
0 |
|
 |
3 |
 |
1.50 |
1.68 |
68.5 |
-1.36 |
-0.14 |
12.9 |
73 |
5 |
2 |
4 |
4 |
4 |
5 |
0 |
|
 |
4 |
 |
1.43 |
1.57 |
74.5 |
-1.23 |
-0.20 |
15.5 |
78 |
8 |
3 |
4 |
6 |
4 |
4 |
0 |
HEM 801 B
|
 |
5 |
 |
1.17 |
2.59 |
75.2 |
-1.25 |
-0.39 |
15.0 |
81 |
8 |
5 |
7 |
5 |
3 |
2 |
0 |
|
 |
6 |
 |
1.40 |
1.54 |
80.9 |
-1.86 |
-0.22 |
20.5 |
71 |
9 |
4 |
2 |
4 |
4 |
7 |
0 |
HEM 801 B
|
 |
7 |
 |
1.23 |
1.23 |
88.1 |
0.04 |
-0.20 |
9.3 |
88 |
5 |
4 |
5 |
10 |
1 |
1 |
0 |
|
 |
8 |
 |
1.24 |
2.41 |
119.0 |
-1.13 |
-0.21 |
16.9 |
81 |
15 |
6 |
7 |
11 |
5 |
3 |
0 |
HEM 801 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |