PDBsum entry 6zwc

Tunnel analysis for: 6zwc calculated with

MOLE 2.0

PDB id

6zwc

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

2 tunnels, coloured by tunnel radius

6 tunnels, coloured by tunnel radius

6 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.30

1.37

34.5

0.74

0.23

5.1

79

2

0

4

9

2

0

1

QRQ 502 B

2

1.31

1.34

40.6

0.96

0.26

4.0

75

1

1

3

10

2

0

1

QRQ 502 B

3

1.30

1.37

45.4

0.12

-0.06

6.2

78

1

1

5

8

2

1

1

QRQ 502 B

4

1.30

1.32

50.2

0.16

0.02

9.4

76

2

2

4

8

3

0

1

QRQ 502 B

5

1.25

1.81

15.8

-1.12

-0.34

5.4

78

0

1

2

2

1

2

0

6

1.36

1.80

15.8

-1.90

-0.30

23.3

79

2

2

1

2

1

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.