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PDBsum entry 6zqw

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Pore analysis for: 6zqw calculated with MOLE 2.0 PDB id
6zqw
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.26 31.5 1.36 0.37 2.7 88 1 0 0 4 0 1 0  
2 1.16 1.69 52.5 0.03 -0.34 4.6 91 1 0 3 5 1 1 0  
3 1.21 1.79 79.0 -0.77 -0.24 17.1 83 7 1 3 6 2 1 0  
4 1.50 1.83 94.6 -0.06 -0.04 10.3 83 7 1 4 14 5 1 0  
5 1.51 1.93 94.4 1.89 0.43 1.2 83 0 0 3 18 3 1 0  
6 1.32 1.57 95.9 -1.20 -0.13 20.0 75 9 4 4 5 4 3 1  
7 1.19 1.79 128.7 0.84 0.11 2.8 85 2 0 6 19 3 2 0  
8 1.17 1.73 134.0 -1.09 -0.28 11.8 75 5 5 7 4 7 3 1  
9 1.56 1.79 153.2 -1.91 -0.57 21.3 81 12 7 6 3 4 3 0  NAG 201 B
10 1.21 1.44 176.1 -1.62 -0.41 21.5 82 14 13 5 5 5 2 1  
11 1.18 1.32 381.3 -0.82 -0.23 15.2 83 24 11 17 28 7 5 1  NAG 201 B
12 1.25 1.25 389.6 -1.51 -0.41 19.2 80 29 14 19 14 11 8 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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