 |
PDBsum entry 6zoz
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 6zoz calculated with  MOLE 2.0
|
PDB id
|
|
|
|
6zoz
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
64 tunnels,
coloured by tunnel radius |
|
20 tunnels,
coloured by
tunnel radius
|
20 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.12 |
2.12 |
65.3 |
-1.17 |
-0.25 |
21.3 |
83 |
|
4 |
7 |
4 |
6 |
3 |
2 |
0 |
|
|
 |
|
2 |
 |
2.11 |
2.11 |
65.4 |
-0.99 |
-0.21 |
19.8 |
83 |
4 |
7 |
4 |
6 |
3 |
2 |
0 |
|
|
3 |
 |
2.12 |
2.12 |
66.0 |
-1.16 |
-0.23 |
21.4 |
83 |
4 |
7 |
4 |
6 |
3 |
2 |
0 |
|
|
4 |
 |
1.75 |
4.00 |
80.0 |
-1.52 |
-0.32 |
24.4 |
83 |
7 |
9 |
5 |
4 |
4 |
1 |
0 |
|
|
5 |
 |
1.73 |
3.97 |
79.3 |
-1.44 |
-0.30 |
24.1 |
83 |
7 |
9 |
5 |
4 |
4 |
1 |
0 |
|
|
6 |
 |
1.73 |
3.98 |
79.3 |
-1.40 |
-0.29 |
23.9 |
83 |
7 |
9 |
5 |
4 |
4 |
1 |
0 |
|
|
7 |
 |
2.03 |
2.02 |
80.7 |
-1.25 |
-0.18 |
19.8 |
85 |
6 |
7 |
7 |
6 |
8 |
0 |
0 |
|
|
8 |
 |
2.02 |
2.07 |
81.3 |
-1.19 |
-0.18 |
18.8 |
85 |
6 |
7 |
7 |
6 |
8 |
0 |
0 |
|
|
9 |
 |
1.84 |
1.89 |
89.1 |
-0.96 |
-0.20 |
16.5 |
86 |
6 |
7 |
8 |
6 |
7 |
0 |
0 |
|
|
10 |
 |
2.01 |
2.05 |
88.4 |
-1.10 |
-0.11 |
18.1 |
83 |
6 |
7 |
7 |
7 |
9 |
0 |
0 |
|
|
11 |
 |
2.08 |
2.11 |
92.3 |
-1.46 |
-0.35 |
20.6 |
87 |
8 |
8 |
10 |
6 |
3 |
1 |
0 |
|
|
12 |
|
2.10 |
2.12 |
93.2 |
-1.53 |
-0.36 |
21.8 |
86 |
9 |
8 |
10 |
6 |
3 |
1 |
0 |
|
|
13 |
|
2.08 |
2.11 |
93.8 |
-1.47 |
-0.36 |
20.1 |
88 |
8 |
9 |
11 |
5 |
3 |
1 |
0 |
|
|
14 |
|
2.85 |
2.85 |
18.8 |
-0.98 |
-0.30 |
17.1 |
81 |
1 |
1 |
3 |
2 |
2 |
0 |
0 |
|
|
15 |
|
1.72 |
2.00 |
20.5 |
-1.48 |
-0.29 |
21.5 |
77 |
1 |
2 |
3 |
2 |
2 |
0 |
0 |
|
|
16 |
|
2.85 |
2.85 |
18.8 |
-0.98 |
-0.30 |
17.1 |
81 |
1 |
1 |
3 |
2 |
2 |
0 |
0 |
|
|
17 |
|
1.72 |
2.00 |
20.5 |
-1.48 |
-0.29 |
21.5 |
77 |
1 |
2 |
3 |
2 |
2 |
0 |
0 |
|
|
18 |
|
1.29 |
1.76 |
17.9 |
0.36 |
-0.03 |
1.8 |
82 |
0 |
0 |
2 |
4 |
1 |
2 |
0 |
|
|
19 |
|
1.30 |
1.76 |
17.1 |
0.38 |
-0.05 |
1.9 |
82 |
0 |
0 |
2 |
4 |
1 |
1 |
0 |
|
 |
20 |
|
1.11 |
1.14 |
16.7 |
-0.94 |
-0.51 |
4.0 |
93 |
0 |
1 |
4 |
2 |
1 |
0 |
0 |
NAG 1308 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program